FC928991

Overview
NameFC928991
Unique NameFC928991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12114 contig Ccv1_Contig12114:965..1499. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17
Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    2 ARGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            A GTPN + WP V SL D+KS FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  219 ALGTPNNEVWPEVESLQDYKSTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.865e-17
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    2 ARGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            A GTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  219 ALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 7.865e-17
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    2 ARGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            A GTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL H YF D++
Sbjct:  219 ALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.027e-16
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 2
Query:    2 ARGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            A GTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL+H YF D++
Sbjct:  219 ALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_MOUSE (Cell division control protein 2 homolog OS=Mus musculus GN=Cdc2 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.027e-16
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 2
Query:    2 ARGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            A GTPN + WP V SL D+K+ FPKW    L + V+NL+  G+DLLSKML  DP++RI+ + AL+H YF D++
Sbjct:  219 ALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.027e-16
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 2
Query:    2 ARGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            A GTPN + WP V SL D+K++FPKW    L   V+N++  G+DLL+KML  DP++RI+AR AL H YF D++
Sbjct:  219 ALGTPNNEVWPEVESLQDYKNSFPKWKGGSLSANVKNIDKDGLDLLAKMLIYDPAKRISARKALLHPYFDDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.342e-16
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            GTPN + WP V SL D+K+ FPKW    L + V+N++  G+DLLSKML  DP++RI+AR A+ H YF D++
Sbjct:  221 GTPNNEVWPEVESLQDYKNTFPKWKGGSLSSNVKNIDEDGLDLLSKMLVYDPAKRISARKAMLHPYFDDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.752e-16
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 220
            GTPN + WP V SL D+K+ FPKW    L   V+N++  G+DLL+KML  DP++RI+AR AL H YF D++
Sbjct:  221 GTPNNEVWPEVESLQDYKNTFPKWKGGSLAANVKNIDKEGLDLLAKMLVYDPAKRISARKALLHPYFDDLD 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.288e-16
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2
Query:   11 TPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 208
            TP ED WPGVTSLPD+K+ FP W + +L   ++NL+  GIDL+ KML  DP  RI+A+  LEH YF
Sbjct:  222 TPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQLKNLDANGIDLIQKMLIYDPVHRISAKDILEHPYF 287          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.288e-16
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 211
            GTP+E+TWPGVTS PDFK++FPKW  ++   +V  LE  G+DLL  ML  DP+RRI+A+ A  H YF+
Sbjct:  241 GTPDENTWPGVTSFPDFKASFPKWKREDTRKLVPGLERNGLDLLDAMLEYDPARRISAKQACMHPYFQ 308          
The following BLAST results are available for this feature:
BLAST of FC928991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CDC2_BOVIN3.531e-1753.42Cell division control protein 2 homolog OS=Bos tau... [more]
CDC2_PONAB7.865e-1752.05Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2_HUMAN7.865e-1752.05Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_RAT1.027e-1652.05Cell division control protein 2 homolog OS=Rattus ... [more]
CDC2_MOUSE1.027e-1652.05Cell division control protein 2 homolog OS=Mus mus... [more]
CDC2A_XENLA1.027e-1652.05Cell division control protein 2-A OS=Xenopus laevi... [more]
CDC2B_XENLA1.342e-1652.11Cell division control protein 2-B OS=Xenopus laevi... [more]
CDC2_RANDY1.752e-1652.11Cell division control protein 2 homolog OS=Rana dy... [more]
CDC2_DROME2.288e-1656.06Cell division control protein 2 homolog OS=Drosoph... [more]
CDC2_AJECA2.288e-1655.88Cell division control protein 2 OS=Ajellomyces cap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BF04RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928991 ID=FC928991; Name=FC928991; organism=Citrus clementina; type=EST; length=535bp
GGCACGAGGAACACCTAATGAGGACACATGGCCTGGAGTGACTTCATTGC
CTGACTTTAAATCTGCCTTTCCTAAATGGCCTTCTAAGGAGTTGGGGACT
GTTGTTCGAAATCTTGAGCCAGCTGGCATTGATCTCCTTTCTAAAATGCT
CTGCATGGATCCAAGCAGAAGAATTACTGCCAGAAGTGCTCTAGAACATG
AATACTTCAGGGACGTCGAATTTGTACCCTAATATCTGTTGTATATGCTA
TTAGAGTGTTGACATTATTGTGAAGCCTTCGGTTTTGATTGTTTGCGAAA
TTTGCCGACTGTCTTTACTTGCAGTTTTACTGAAAAGTCTTACTACATGG
AATGGCTTTTTACAGTCATCTCTGGATTTGCCTAGTTTGTAATCGTGTAT
TCGCGGCTTTCTTGATCTTGTGGATAAATGTTTGTGCCAGTTTTTCTTTT
AATATTTGATATGTAATACACCAAATTGAATTTGTTGTTCGAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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