FC928991

Overview
NameFC928991
Unique NameFC928991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12114 contig Ccv1_Contig12114:965..1499. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.618e-12
Identity = 31/70 (44.29%), Postives = 49/70 (70.00%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 217
            GTPN D+WP V +LP +   F  +  +   ++V  L  +GIDL+S+ML +DP +RI+A+ AL+H+YF+D+
Sbjct:  218 GTPNVDSWPQVVNLPAYNPDFCYYEKQAWSSIVPKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDL 287          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.618e-12
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 214
            GTPN   WP VT LP +   F  +      T ++ L+  GIDLLSKML +DP++RITA+ AL+H YF++
Sbjct:  218 GTPNSANWPSVTELPKYDPDFIVYEPLPWETFLKGLDDTGIDLLSKMLRLDPNQRITAKEALQHAYFKE 286          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.466e-12
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 208
            GTP ED W GVT LP + S FPKW +K+L T+    E A +DLL KM    P +RI+A  AL+H +F
Sbjct:  218 GTPTEDIWNGVTKLPFYLSTFPKWKAKDLHTIFHTDERA-VDLLQKMFIYTPEKRISAADALKHPFF 283          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.833e-12
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 217
            GTPNE TWPGV+S  +FK+ +  +  ++L  ++ NL+  G++LLS +L M P  RITAR AL+H +F ++
Sbjct:  224 GTPNERTWPGVSSYANFKNNWQIFVPQDLRLLIPNLDSMGLNLLSSLLQMRPDARITARQALQHPWFHEI 293          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11
Identity = 28/69 (40.58%), Postives = 46/69 (66.67%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRD 214
            GTPNE TWP ++SLP+++S F  +  ++L  ++  ++   +DLL  +L + P  RITAR +LEH +F +
Sbjct:  223 GTPNESTWPNISSLPNYRSNFQVYAPQDLRVIIPQIDNVALDLLLSLLQLKPENRITARQSLEHPWFAE 291          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11
Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 208
            GTP+++ WPGV+SL D+   +P+W  +     V +L P G+DLL+K L  DP+ RI+A++AL+H YF
Sbjct:  232 GTPSDEQWPGVSSLRDWH-VYPQWEPQNSAPAVPSLGPDGLDLLTKTLKYDPADRISAKAALDHPYF 297          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 208
            GTP E +WPG++ LP++K  FP + +++L  +    +P G+DLL +ML + P  R T + AL+H +F
Sbjct:  219 GTPTEQSWPGISLLPEYKPTFPIYKAQDLAYLFPTFDPLGLDLLRRMLRLQPELRTTGQDALQHAWF 285          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.449e-11
Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 217
            GTPNE TWPG++   ++K+ +  +  ++L  +V NL+  G++LL  +L M P  RITAR AL+H +F ++
Sbjct:  224 GTPNERTWPGISQYTNYKNNWQIFVPQDLRLIVPNLDSMGLNLLQSLLQMRPESRITARQALQHPWFHEI 293          
BLAST of FC928991 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.449e-11
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 2
Query:    8 GTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 226
            GTPN   W  V + P++K  FP W   +L T+ R  +P  +DL+SKML  DP  R+TA++ L H+YF  +  +
Sbjct:  223 GTPNNSRWSNVENFPNYKVEFPVWDPVDLKTIFRG-DPDFVDLISKMLEYDPKMRMTAKNGLSHKYFEGMPLI 294          
The following BLAST results are available for this feature:
BLAST of FC928991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CDC2H_THEAN2.618e-1244.29Cell division control protein 2 homolog OS=Theiler... [more]
CDC2H_PLAKH2.618e-1247.83Cell division control protein 2 homolog OS=Plasmod... [more]
CDK2_ENTHI4.466e-1250.75Cell division protein kinase 2 homolog OS=Entamoeb... [more]
PHO85_DEBHA5.833e-1245.71Negative regulator of the PHO system OS=Debaryomyc... [more]
PHO85_YARLI1.697e-1140.58Negative regulator of the PHO system OS=Yarrowia l... [more]
CDC2C_ANTMA2.895e-1146.27Cell division control protein 2 homolog C OS=Antir... [more]
PEF1_SCHPO3.781e-1140.30Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
PHO85_CANAL6.449e-1141.43Negative regulator of the PHO system OS=Candida al... [more]
CDC28_ENCCU6.449e-1141.10Probable cell division control protein 28 homolog ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BF04RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928991 ID=FC928991; Name=FC928991; organism=Citrus clementina; type=EST; length=535bp
GGCACGAGGAACACCTAATGAGGACACATGGCCTGGAGTGACTTCATTGC
CTGACTTTAAATCTGCCTTTCCTAAATGGCCTTCTAAGGAGTTGGGGACT
GTTGTTCGAAATCTTGAGCCAGCTGGCATTGATCTCCTTTCTAAAATGCT
CTGCATGGATCCAAGCAGAAGAATTACTGCCAGAAGTGCTCTAGAACATG
AATACTTCAGGGACGTCGAATTTGTACCCTAATATCTGTTGTATATGCTA
TTAGAGTGTTGACATTATTGTGAAGCCTTCGGTTTTGATTGTTTGCGAAA
TTTGCCGACTGTCTTTACTTGCAGTTTTACTGAAAAGTCTTACTACATGG
AATGGCTTTTTACAGTCATCTCTGGATTTGCCTAGTTTGTAATCGTGTAT
TCGCGGCTTTCTTGATCTTGTGGATAAATGTTTGTGCCAGTTTTTCTTTT
AATATTTGATATGTAATACACCAAATTGAATTTGTTGTTCGAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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