FC928993

Overview
NameFC928993
Unique NameFC928993
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.480e-38
Identity = 77/128 (60.16%), Postives = 91/128 (71.09%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            V MLLGAAK+LQ  R+   G V LVFQPAEEG  G + VLE G ++ V  IFG+HVD  LP G VASRPGP LAGS  F A I GKGGHAA P H++DPI+A S+ ++SLQ +V+RE DPL   VV V
Sbjct:  120 VAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAVVSV 247          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.189e-34
Identity = 73/126 (57.94%), Postives = 93/126 (73.81%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            MLLGAAK+L E +E++KGTV L+FQPAEEGG GA  +++ GVL+ V AIFG+HVD  +P G +A+  GP  A   F+EA I GK G A  P  ++DPI+AAS VI+SLQ L+SRE DPL SQV+ V
Sbjct:  130 MLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQVLSV 255          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: ILL4_ORYSJ (IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.183e-32
Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            V MLL AAK+LQ  R+   G V LVFQPAE G GG H VL+ GVL+    IF +HV  +LP G V SRPGP LAGS  F A I GKGGHAA P  ++DPI+AAS+ ++SLQ +V+RE +PL   VV V
Sbjct:  116 VAMLLVAAKLLQSRRDHFNGKVKLVFQPAEGGAGGYH-VLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFTATITGKGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAVVSV 242          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32
Identity = 67/128 (52.34%), Postives = 93/128 (72.66%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            V MLLGAAK+LQ  +  +KGTV LVFQP EEG  GA+++L+  +L+ ++ I  +HV P++P G + SRPG +LAG+G F   + G+G HAA P  S DP+LAAS+ +V+LQ +VSRE DPL++ VV V
Sbjct:  144 VAMLLGAAKLLQTTKHLIKGTVKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTVTVHGQGSHAATPHFSKDPVLAASSAVVALQQIVSRELDPLEAGVVTV 271          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: YXEP_BACSU (Uncharacterized hydrolase yxeP OS=Bacillus subtilis GN=yxeP PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 7.665e-32
Identity = 68/127 (53.54%), Postives = 86/127 (67.72%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            ++G A +L + R ELKGTV  +FQPAEE   GA KVLEAGVL  V+AIFG+H  P+LP+G +  + GPL+A    FE VI GKGGHA IP +SIDPI AA  +I  LQ +VSR    L + VV + +
Sbjct:  107 IIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHAGIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITR 233          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.913e-31
Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            V MLLGAAKIL+     L+GTV L+FQPAEE G GA +++E G LE V AIF +HV    P   + SR GPLLAG GFF+AVI G        + S D +LAA++ I+SLQ +VSREADPLDSQVV V
Sbjct:  204 VAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHG-------GRRSGDAVLAAASTIISLQSIVSREADPLDSQVVSV 324          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: YTNL_BACSU (Uncharacterized hydrolase ytnL OS=Bacillus subtilis GN=ytnL PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.087e-29
Identity = 62/127 (48.82%), Postives = 89/127 (70.08%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            LLGAA +L+E+++ LKG + L+FQPAEE G GA KV+E G L+ ++A+ GLH  P++ +G V  + GPL+A    F+  I GKG HAA+P +  DPI+ AS +IV+LQ +VSR  +PL S ++ V K
Sbjct:  137 LLGAAFLLKENQDSLKGKIRLLFQPAEEAGAGATKVIEDGQLDGIDAVIGLHNKPDIAVGTVGLKTGPLMAAVDRFKVEIEGKGAHAALPHNGFDPIIGASQLIVALQTIVSRNVNPLQSAILTVGK 263          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 3.560e-29
Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            VTMLLGAA IL+     LKGTVVL+FQPAEE G GA  ++E G L+ V AIF +HV    P G + SR GPLLAG G F AVI  +    A      + +LAAS+ ++SLQ +VSREA PLDSQVV V
Sbjct:  181 VTMLLGAAHILKAREHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDDVEAIFAVHVSHIHPTGVIGSRSGPLLAGCGIFRAVITSEDSRGA-----ANLLLAASSAVISLQGIVSREASPLDSQVVSV 303          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.352e-27
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            TMLLGAAK+L + +  L GTV L+FQPAEEGG GA  +++ G L    AIFG+HV   LP GE+A+  GP LA +  F   + GK   ++     +DP+LAAS+ I++LQ ++SRE DPL S V+ V
Sbjct:  134 TMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLSHVLSV 260          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: CBPX2_SULSO (Thermostable carboxypeptidase 2 OS=Sulfolobus solfataricus GN=cpsA2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.919e-23
Identity = 50/130 (38.46%), Postives = 83/130 (63.85%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGG--GAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            V MLLG A +L ++++ + G + L+FQPAEE GG  GA  ++EAGV+  V+ +FG+H+  + P G  A+R GP++A    F+ V+ GKGGH + P  +IDPI  +  +  ++  + +R+ DP+   V+ +
Sbjct:  112 VAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMATPDAFKIVVHGKGGHGSAPHETIDPIFISLQIANAIYGITARQIDPVQPFVISI 241          
The following BLAST results are available for this feature:
BLAST of FC928993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
ILL3_ORYSJ5.480e-3860.16IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]
ILL5_ORYSJ8.189e-3457.94IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILL4_ORYSJ1.183e-3257.03IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sati... [more]
ILR1_ARATH1.544e-3252.34IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
YXEP_BACSU7.665e-3253.54Uncharacterized hydrolase yxeP OS=Bacillus subtili... [more]
ILL6_ORYSJ2.913e-3157.03IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
YTNL_BACSU2.087e-2948.82Uncharacterized hydrolase ytnL OS=Bacillus subtili... [more]
ILL6_ARATH3.560e-2955.47IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]
ILL3_ARATH4.352e-2748.82IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
CBPX2_SULSO2.919e-2338.46Thermostable carboxypeptidase 2 OS=Sulfolobus solf... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928993 ID=FC928993; Name=FC928993; organism=Citrus clementina; type=EST; length=390bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAN
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGGAAGTTCCAAAA
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