FC928993

Overview
NameFC928993
Unique NameFC928993
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase yhaA OS=Bacillus subtilis GN=yhaA PE=3 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 4.980e-23
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEG-GGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            LL  AK+L ++R ELKGT V++ Q AEE   GGA  +++ G LE  + IFG H+    P+G +  RPG ++A +  F   + GKGGH A P  + D +L  S ++ SLQH+VSR+ +P+ S V+
Sbjct:  117 LLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGAKPMIDDGCLENTDVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGKGGHGAHPHDTKDAVLIGSQIVSSLQHIVSRKVNPIQSAVI 240          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: CBPX1_SULSO (Thermostable carboxypeptidase 1 OS=Sulfolobus solfataricus GN=cpsA1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 4.980e-23
Identity = 48/130 (36.92%), Postives = 83/130 (63.85%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGG--GAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            V MLLG A +L ++++ + G + L+FQPAEE GG  GA  ++EAGV+  V+ +FG+H+  + P G  A+R GP++A    F+ ++ GKGGH + P  +IDPI  +  +  ++  + +R+ DP+   ++ +
Sbjct:  112 VAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMATPDAFKIIVHGKGGHGSAPHETIDPIFISLQIANAIYGITARQIDPVQPFIISI 241          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACSK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus clausii (strain KSM-K16) GN=dapL PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.092e-21
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG       H  E    ++ +FQPAEEG GGA  ++EA VL   + + I+ LH+DPNLP+G +A++PG L A +        GKGGHAA P  + D ++A ++ +  +Q +V+R  DPLDS VV
Sbjct:   99 MTIALGLLDHFASHEPECH--LLFIFQPAEEGPGGAKPIIEADVLGAWQPDEIYALHIDPNLPVGSIATKPGLLFANTSELFIDFQGKGGHAAYPHTANDMVVACAHFVTQVQTVVARNIDPLDSAVV 224          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: AMAA_BACST (N-acyl-L-amino acid amidohydrolase OS=Bacillus stearothermophilus GN=amaA PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.661e-21
Identity = 52/127 (40.94%), Postives = 80/127 (62.99%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            MLLG AKI  + R++++G +  +FQ AEE   GGA ++++AGV++ V+ + G H+   L  G++    GP++A    F   I GKGGH A+P  +ID I   + V+ +LQH+VSR  DPL+  V+ V
Sbjct:  112 MLLGTAKIFSQLRDDIRGEIRFLFQHAEELFPGGAEEMVQAGVMDGVDVVIGTHLWSPLERGKIGIVYGPMMAAPDRFFIRIIGKGGHGAMPHQTIDAIAIGAQVVTNLQHIVSRYVDPLEPLVLSV 238          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACHK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus thuringiensis subsp. konkukian GN=dapL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACCZ (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ZK / E33L) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACCQ (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain Q1) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACC7 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain AH187) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACC3 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain 03BB102) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACC1 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 10987) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
The following BLAST results are available for this feature:
BLAST of FC928993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
YHAA_BACSU4.980e-2342.74Putative amidohydrolase yhaA OS=Bacillus subtilis ... [more]
CBPX1_SULSO4.980e-2336.92Thermostable carboxypeptidase 1 OS=Sulfolobus solf... [more]
DAPL_BACSK2.092e-2141.41Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
AMAA_BACST4.661e-2140.94N-acyl-L-amino acid amidohydrolase OS=Bacillus ste... [more]
DAPL_BACHK1.038e-2043.59Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCZ1.038e-2043.59Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCQ1.038e-2043.59Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC71.038e-2043.59Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC31.038e-2043.59Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC11.038e-2043.59Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928993 ID=FC928993; Name=FC928993; organism=Citrus clementina; type=EST; length=390bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAN
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGGAAGTTCCAAAA
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