FC928993

Overview
NameFC928993
Unique NameFC928993
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_OCEIH (Putative N-acetyldiaminopimelate deacetylase OS=Oceanobacillus iheyensis GN=dapL PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.730e-20
Identity = 55/132 (41.67%), Postives = 79/132 (59.85%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            +T+ LGA + L +  + +   V+ VFQPAEEG GGA  +LE+   +  K + +F LH+ P LP+G V+S+ G L A +        G GGHAA P  + D  +AASN +V LQ +VSR  +PLD  V+ + K
Sbjct:   99 MTIALGALEKLIQ--DPINDDVIFVFQPAEEGPGGAKPMLESEEFQQWKPDMMFALHIAPELPVGTVSSKAGLLFANTSELFIDFEGVGGHAAYPHLTKDMTVAASNFVVQLQQIVSRGLNPLDGSVITIGK 228          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.730e-20
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACC4 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain B4264) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.730e-20
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACC2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain G9842) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.730e-20
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+ + K
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGK 229          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.790e-20
Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIF--GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            E +K  ++ +FQPAEEG GGA  +L + VL+K    F   LH+ P  P+G +A++PG L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V+ +
Sbjct:  114 EPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDPLDSAVITI 228          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_EXIS2 (Putative N-acetyldiaminopimelate deacetylase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.148e-19
Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1
Query:   64 VVLVFQPAEEGGGGAHKVLEAGVLEKV--NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            VV +FQPAEEG GGA  ++++ + EK   + ++GLHV P  P+G +ASRPG L A +      I G+ GHAA P  +ID ++A + +I+ LQ +VSR  +P++  V+ + K
Sbjct:  117 VVFLFQPAEEGPGGAEPMIKSPLFEKYRPSEMYGLHVAPEYPVGTIASRPGVLFASAREVHITIYGQSGHAAFPHLTIDTVVAQAALIMQLQTIVSRSINPMNCSVITIGK 227          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.499e-19
Identity = 49/132 (37.12%), Postives = 80/132 (60.61%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            +++ LG      EH   ++  ++ +FQPAEEG GGA  +LE+ +++  K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA +++  LQ +V+R  DPLDS V+ + K
Sbjct:  101 MSIALGLLTHFAEH--PIQDDLLFIFQPAEEGPGGAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACSLVTQLQSIVARNVDPLDSAVITIGK 230          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_GEOKA (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus kaustophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.958e-19
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 1
Query:   52 LKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            LK  ++ VFQPAEEG GGA  +LE+ ++   K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA  ++  LQ +V+R  DPLDS V+ + K
Sbjct:  116 LKDDLLFVFQPAEEGPGGAKPMLESDIMREWKPDIIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACALVTQLQSIVARNVDPLDSAVITIGK 230          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKV---NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            +T+ LG      +H+   K  +++ FQPAEE   G  +  +AG  +     +  + LHV+P LP G++ASR G L AGS        GK GHAA PQ++ D I+AA+N + ++Q +VSR  DP++  VV + K
Sbjct:  104 MTVALGILSYFAKHQP--KDNLLVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAGSNELRISFIGKSGHAAYPQNAKDSIVAAANFVTNVQTVVSRNVDPIEGGVVTIGK 234          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_BACLD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dapL PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 46/116 (39.66%), Postives = 73/116 (62.93%), Query Frame = 1
Query:   43 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEV 384
            R  +K  ++ +FQPAEEG GGA  +LE+ + +K   + I  LH+ P LP+G + ++ G L A +      + GKGGHAA P  + D ++AAS+++  +Q +V+R  DPLDS V+ +
Sbjct:  112 RHPVKQDLLFLFQPAEEGPGGAEPMLESDLFKKWEPSMITALHIAPELPVGTIGTKSGLLFANTSELVIELEGKGGHAAYPHLAEDMVVAASSLVTQMQSIVARNVDPLDSAVITI 227          
The following BLAST results are available for this feature:
BLAST of FC928993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_OCEIH6.730e-2041.67Putative N-acetyldiaminopimelate deacetylase OS=Oc... [more]
DAPL_BACCR6.730e-2039.84Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC46.730e-2039.84Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC26.730e-2039.84Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACP28.790e-2042.61Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_EXIS21.148e-1942.34Putative N-acetyldiaminopimelate deacetylase OS=Ex... [more]
DAPL_GEOSW1.499e-1937.12Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_GEOKA1.958e-1941.74Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
DAPL_OENOB2.557e-1938.35Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]
DAPL_BACLD2.557e-1939.66Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928993 ID=FC928993; Name=FC928993; organism=Citrus clementina; type=EST; length=390bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAN
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGGAAGTTCCAAAA
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