FC928993

Overview
NameFC928993
Unique NameFC928993
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRPS (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain CGSP14) GN=dapL PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.926e-15
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRP7 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain 70585) GN=dapL PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.926e-15
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.926e-15
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  K L + + +     + +FQPAEE   G   + E     +   +  + LHV+P+LP+G +++R G L A +      + GKGGHAA P  + D +LAA+N+I   Q +VSR  DP+   VV
Sbjct:  103 MTIGLGVLKELSQQQPD--NNFLFLFQPAEENEAGGMLMYEDHAFGEWLPDEFYALHVNPDLPVGTISTRVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDPVVGAVV 228          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRSY (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 05ZYH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.519e-15
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  VV
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRS2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 98HAH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.519e-15
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  VV
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_LACLA (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. lactis GN=dapL PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.519e-15
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVEVPK 390
            +T+ LG  + + E +   +  ++ +FQPAEE   G   + +A   E    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  I  +Q +VSR  DPL S VV   K
Sbjct:   99 MTVALGLLEKMSESQP--RDNLLFLFQPAEENEAGGKLMYDARAFENWLPDEFYGLHVRPDLKVGDIATNQHTLFAGTCEVELSFIGTGGHAAFPHTANDALVAAAYFITQVQTIVSRNVDPLASAVVTFGK 228          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRZP (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain P1031) GN=dapL PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.514e-15
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L  G+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFVGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRPN (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae GN=dapL PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.112e-14
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRMU (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus mutans GN=dapL PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.452e-14
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            K  ++ +FQPAEE   G   + E G     + +  +GLHV P+  +G++A+    L AG+        GKGGHAA P ++ D ++AAS  I  +Q +VSR  DP++  VV
Sbjct:  117 KNNLLFLFQPAEENEAGGMLMYEDGAFGNWQPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVFITFKGKGGHAAFPHNANDALVAASYFITQVQTIVSRNVDPIEGGVV 226          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.477e-14
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGG-GGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            TML+GAA +L ++    +  V LVFQPAEE   GGA   + AG L+ V+ IF LH DP+L +G++++R GP+ + +      +   GGH A P  + D I A + ++  L  ++ R  D   + V+
Sbjct:  514 TMLMGAASVLTKYPPPTR--VRLVFQPAEETTPGGAVDTIAAGALDGVSKIFALHCDPHLEVGKLSTRTGPITSSNDSVTVRLWSAGGHTARPHLTGDLIHATAVLVTGLASVLDRRIDARTATVL 637          
The following BLAST results are available for this feature:
BLAST of FC928993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_STRPS2.926e-1535.94Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP72.926e-1535.94Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_ENTFA2.926e-1535.94Putative N-acetyldiaminopimelate deacetylase OS=En... [more]
DAPL_STRSY6.519e-1535.16Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRS26.519e-1535.16Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACLA6.519e-1535.61Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRZP8.514e-1535.16Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPN1.112e-1435.16Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRMU1.452e-1437.27Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
CAAL4_RHOSR2.477e-1436.51Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928993 ID=FC928993; Name=FC928993; organism=Citrus clementina; type=EST; length=390bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAN
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGGAAGTTCCAAAA
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