FC928993

Overview
NameFC928993
Unique NameFC928993
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRP4 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=dapL PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.235e-14
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++ AS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVVASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRTD (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dapL PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.225e-14
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VV
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVV 226          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRT2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dapL PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.225e-14
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VV
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVV 226          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRT1 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dapL PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.225e-14
Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VV
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVV 226          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRZJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain JJA) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRR6 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRPJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: DAPL_STRP2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVV 378
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VV
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVV 225          
BLAST of FC928993 vs. ExPASy Swiss-Prot
Match: AMHX_BACSU (Amidohydrolase amhX OS=Bacillus subtilis GN=amhX PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 3.955e-12
Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIXGKGGHAAIPQHSIDPILAASNVIVSL 330
            +TM LG   +L++  E  KGT+  +FQPAEE GGGA K++E GVL+ ++ ++G+HV P          P  L   S   E  I G+  H A P    + I  A+ ++  L
Sbjct:   96 MTMALGTLMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSILHGSSQHIEGTIIGEEAHGARPHLGKNSIEIAAFLVHKL 205          
The following BLAST results are available for this feature:
BLAST of FC928993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_STRP43.235e-1434.38Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRTD4.225e-1437.27Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT24.225e-1437.27Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT14.225e-1437.27Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRZJ7.207e-1434.38Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRR67.207e-1434.38Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPJ7.207e-1434.38Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPI7.207e-1434.38Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP27.207e-1434.38Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
AMHX_BACSU3.955e-1236.36Amidohydrolase amhX OS=Bacillus subtilis GN=amhX P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928993 ID=FC928993; Name=FC928993; organism=Citrus clementina; type=EST; length=390bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAN
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGGAAGTTCCAAAA
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