FC928998

Overview
NameFC928998
Unique NameFC928998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNV (FK506-binding protein 1 OS=Cryptococcus neoformans var. grubii GN=FRR1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            GD + +HY G L DG+ FDSS +RG P    +G G VI+GWD+G+  + VG+K  L       YGA+G PP IP  +TL F+ EL+ VN
Sbjct:   20 GDNVTIHYVGTLLDGSKFDSSRDRGTPFVCRIGQGQVIRGWDEGVPQLSVGQKANLICTPDYAYGARGFPPVIPPNSTLKFEVELLKVN 108          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP_ASHGO (FK506-binding protein 1 OS=Ashbya gossypii GN=FPR1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            GD + +HY G L +   FDSS +RG P +  +G G VIKGWD  +  + VGEK +L IP    YG +G P  IP  ATLIF+ EL+ VN
Sbjct:   26 GDLVTIHYTGTLENEQKFDSSVDRGSPFQCNIGVGQVIKGWDVAIPKLSVGEKARLTIPGAYAYGPRGFPGLIPPNATLIFEVELLKVN 114          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            GD++ VHY G L DGT FDSS +R D   F+LG G VIK WD  +  M VGE   +    +  YG+ GSPP IP  ATL+F+ EL    G+
Sbjct:   50 GDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGE 140          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP4_BOVIN (FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=1 SV=4)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 467
            GD++ VHY G L DGT FDSS +R D   F+LG G VIK WD  +  M VGE   +    +  YG  GSPP IP  ATL+F+ EL    G+  + E+
Sbjct:   50 GDRVFVHYTGWLLDGTKFDSSLDRKDRFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGLAGSPPKIPPNATLVFEVELFEFKGEDLTEEE 146          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNE (FK506-binding protein 1 OS=Cryptococcus neoformans GN=FPR1 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            GD + +HY G L DG+ FDSS +RG P    +G G VI+GWD+G+  + +G+K  L       YGA+G PP IP  +TL F+ EL+ +N
Sbjct:   20 GDSVTIHYVGTLLDGSKFDSSRDRGTPFVCRIGQGQVIRGWDEGVPQLSIGQKANLICTPDYAYGARGFPPVIPPNSTLKFEVELLKIN 108          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP5_SAGOE (FK506-binding protein 5 OS=Saguinus oedipus GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            GDK+ VHY GKL++G  FDSS +R +P  F +G G VIK WD G+  M  GE   L    +  YGA GS P IP  ATL F+ EL+   G+
Sbjct:   50 GDKVYVHYNGKLSNGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELLNFKGE 140          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP5_PONAB (FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            GDK+ VHY+GKL++G  FDSS +R +P  F LG G VIK WD G+  M  GE   L    +  YG+ GS P IP  ATL F+ EL+   G+
Sbjct:   50 GDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE 140          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP5_HUMAN (FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            GDK+ VHY+GKL++G  FDSS +R +P  F LG G VIK WD G+  M  GE   L    +  YG+ GS P IP  ATL F+ EL+   G+
Sbjct:   50 GDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE 140          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP5_AOTNA (FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            GDK+ VHY GKL++G  FDSS +R +P  F +G G VIK WD G+  M  GE   L    +  YGA GS P IP  ATL F+ EL+   G+
Sbjct:   50 GDKVYVHYNGKLSNGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEIELLDFKGE 140          
BLAST of FC928998 vs. ExPASy Swiss-Prot
Match: FKBP4_GIBZE (FK506-binding protein 4 OS=Gibberella zeae GN=FPR4 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            GD + V Y GKL +G  FD++ ++G P  F+ G G VIKGWD G++GM +G +R+L IPA L YG++G  P IP  +TLIFD +L+ +
Sbjct:  409 GDTVGVRYIGKLQNGKQFDAN-KKGKPFSFKAGKGQVIKGWDIGVIGMAIGGERRLTIPAHLAYGSRGL-PGIPANSTLIFDVKLLEI 494          
The following BLAST results are available for this feature:
BLAST of FC928998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKBP_CRYNV9.742e-1847.19FK506-binding protein 1 OS=Cryptococcus neoformans... [more]
FKBP_ASHGO9.742e-1848.31FK506-binding protein 1 OS=Ashbya gossypii GN=FPR1... [more]
FKBP4_RAT9.742e-1848.35FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKBP4_BOVIN9.742e-1846.39FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=... [more]
FKBP_CRYNE1.662e-1744.94FK506-binding protein 1 OS=Cryptococcus neoformans... [more]
FKBP5_SAGOE2.170e-1748.35FK506-binding protein 5 OS=Saguinus oedipus GN=FKB... [more]
FKBP5_PONAB2.170e-1748.35FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 P... [more]
FKBP5_HUMAN2.170e-1748.35FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 P... [more]
FKBP5_AOTNA2.834e-1748.35FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP... [more]
FKBP4_GIBZE2.834e-1748.86FK506-binding protein 4 OS=Gibberella zeae GN=FPR4... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BG05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928998 ID=FC928998; Name=FC928998; organism=Citrus clementina; type=EST; length=722bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCG
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