FC928999

Overview
NameFC928999
Unique NameFC928999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length377
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..377. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.622e-37
Identity = 75/125 (60.00%), Postives = 89/125 (71.20%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            V MLLGAAK+LQ  R+   G V LVFQPAEEG  G + VLE G ++ V  IFG+HVD  LP G VASRPGP LAGS  F A I GKGGHAA P H++DPI+A S+ ++SLQ +V+RE DPL   V
Sbjct:  120 VAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAV 244          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.144e-33
Identity = 72/123 (58.54%), Postives = 91/123 (73.98%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            MLLGAAK+L E +E++KGTV L+FQPAEEGG GA  +++ GVL+ V AIFG+HVD  +P G +A+  GP  A   F+EA I GK G A  P  ++DPI+AAS VI+SLQ L+SRE DPL SQV
Sbjct:  130 MLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQV 252          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.333e-31
Identity = 65/125 (52.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            V MLLGAAK+LQ  +  +KGTV LVFQP EEG  GA+++L+  +L+ ++ I  +HV P++P G + SRPG +LAG+G F   + G+G HAA P  S DP+LAAS+ +V+LQ +VSRE DPL++ V
Sbjct:  144 VAMLLGAAKLLQTTKHLIKGTVKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTVTVHGQGSHAATPHFSKDPVLAASSAVVALQQIVSRELDPLEAGV 268          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: ILL4_ORYSJ (IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.333e-31
Identity = 71/125 (56.80%), Postives = 86/125 (68.80%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            V MLL AAK+LQ  R+   G V LVFQPAE G GG H VL+ GVL+    IF +HV  +LP G V SRPGP LAGS  F A I GKGGHAA P  ++DPI+AAS+ ++SLQ +V+RE +PL   V
Sbjct:  116 VAMLLVAAKLLQSRRDHFNGKVKLVFQPAEGGAGGYH-VLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFTATITGKGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAV 239          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: YXEP_BACSU (Uncharacterized hydrolase yxeP OS=Bacillus subtilis GN=yxeP PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 8.640e-31
Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            ++G A +L + R ELKGTV  +FQPAEE   GA KVLEAGVL  V+AIFG+H  P+LP+G +  + GPL+A    FE VI GKGGHA IP +SIDPI AA  +I  LQ +VSR    L + V
Sbjct:  107 IIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHAGIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAV 228          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.283e-30
Identity = 71/125 (56.80%), Postives = 86/125 (68.80%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            V MLLGAAKIL+     L+GTV L+FQPAEE G GA +++E G LE V AIF +HV    P   + SR GPLLAG GFF+AVI G        + S D +LAA++ I+SLQ +VSREADPLDSQV
Sbjct:  204 VAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHG-------GRRSGDAVLAAASTIISLQSIVSREADPLDSQV 321          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: YTNL_BACSU (Uncharacterized hydrolase ytnL OS=Bacillus subtilis GN=ytnL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.802e-28
Identity = 60/122 (49.18%), Postives = 86/122 (70.49%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            LLGAA +L+E+++ LKG + L+FQPAEE G GA KV+E G L+ ++A+ GLH  P++ +G V  + GPL+A    F+  I GKG HAA+P +  DPI+ AS +IV+LQ +VSR  +PL S +
Sbjct:  137 LLGAAFLLKENQDSLKGKIRLLFQPAEEAGAGATKVIEDGQLDGIDAVIGLHNKPDIAVGTVGLKTGPLMAAVDRFKVEIEGKGAHAALPHNGFDPIIGASQLIVALQTIVSRNVNPLQSAI 258          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 4.013e-28
Identity = 69/125 (55.20%), Postives = 83/125 (66.40%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            VTMLLGAA IL+     LKGTVVL+FQPAEE G GA  ++E G L+ V AIF +HV    P G + SR GPLLAG G F AVI  +    A      + +LAAS+ ++SLQ +VSREA PLDSQV
Sbjct:  181 VTMLLGAAHILKAREHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDDVEAIFAVHVSHIHPTGVIGSRSGPLLAGCGIFRAVITSEDSRGA-----ANLLLAASSAVISLQGIVSREASPLDSQV 300          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.291e-26
Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            TMLLGAAK+L + +  L GTV L+FQPAEEGG GA  +++ G L    AIFG+HV   LP GE+A+  GP LA +  F   + GK   ++     +DP+LAAS+ I++LQ ++SRE DPL S V
Sbjct:  134 TMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLSHV 257          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase yhaA OS=Bacillus subtilis GN=yhaA PE=3 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEG-GGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            LL  AK+L ++R ELKGT V++ Q AEE   GGA  +++ G LE  + IFG H+    P+G +  RPG ++A +  F   + GKGGH A P  + D +L  S ++ SLQH+VSR+ +P+ S V
Sbjct:  117 LLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGAKPMIDDGCLENTDVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGKGGHGAHPHDTKDAVLIGSQIVSSLQHIVSRKVNPIQSAV 239          
The following BLAST results are available for this feature:
BLAST of FC928999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
ILL3_ORYSJ3.622e-3760.00IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]
ILL5_ORYSJ4.144e-3358.54IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILR1_ARATH1.333e-3152.00IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL4_ORYSJ1.333e-3156.80IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sati... [more]
YXEP_BACSU8.640e-3154.92Uncharacterized hydrolase yxeP OS=Bacillus subtili... [more]
ILL6_ORYSJ3.283e-3056.80IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
YTNL_BACSU1.802e-2849.18Uncharacterized hydrolase ytnL OS=Bacillus subtili... [more]
ILL6_ARATH4.013e-2855.20IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]
ILL3_ARATH1.291e-2649.19IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
YHAA_BACSU1.929e-2243.09Putative amidohydrolase yhaA OS=Bacillus subtilis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BG06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928999 ID=FC928999; Name=FC928999; organism=Citrus clementina; type=EST; length=377bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGT
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