FC928999

Overview
NameFC928999
Unique NameFC928999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length377
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..377. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACC1 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 10987) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACC0 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain AH820) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACAN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis GN=dapL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACAH (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus thuringiensis (strain Al Hakam) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACAC (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACAA (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis (strain A0248) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.996e-19
Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG       H   +K  ++ +FQPAEEG GGA  +LE+ VL+K   + I  LH+ P LP+G ++++ G L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V
Sbjct:  100 MTIALGIIDHFVHH--PVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWTPDLITALHIAPELPVGTISTKSGLLFANTSELVIDLEGKGGHAAYPHTADDMVVAASTLVTQLQTVISRNTDPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACCN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dapL PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.607e-19
Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +G   +     + +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  102 IGLGLLTATVNDRIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNMILGLHIAPEYPVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHMANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACWK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dapL PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.448e-19
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V
Sbjct:  113 ERIDDDLVFIFQPAEEGPGGALPMLESDELKEWKPNMILGLHIAPEYSVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.448e-19
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIF--GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            E +K  ++ +FQPAEEG GGA  +L + VL+K    F   LH+ P  P+G +A++PG L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V
Sbjct:  114 EPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDPLDSAV 225          
The following BLAST results are available for this feature:
BLAST of FC928999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_BACC11.170e-1944.64Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC01.170e-1944.64Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAN1.170e-1944.64Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAH1.170e-1944.64Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAC1.170e-1944.64Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAA1.170e-1944.64Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACA21.996e-1940.94Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCN2.607e-1940.65Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACWK4.448e-1943.75Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACP24.448e-1943.75Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BG06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928999 ID=FC928999; Name=FC928999; organism=Citrus clementina; type=EST; length=377bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGT
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