FC928999

Overview
NameFC928999
Unique NameFC928999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length377
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..377. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_LACLS (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dapL PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-16
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  + L E +   K  ++ +FQPAEE   G   + + G  +    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  +  +Q +VSR  DPLDS V
Sbjct:   99 MTVALGLLEKLSESQP--KNNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAV 223          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-16
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  + L E +   K  ++ +FQPAEE   G   + + G  +    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  +  +Q +VSR  DPLDS V
Sbjct:   99 MTVALGLLEKLSESQP--KNNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAV 223          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15
Identity = 45/127 (35.43%), Postives = 67/127 (52.76%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG       HR   K  +  +FQPAEE   G  K+ ++G L++   + I+ LH +P LP G +  R G L AG+        GK GHAA P  + D ++A +  +  +Q +VSR  DP+ S V
Sbjct:  102 MTVALGVLSYFASHRP--KYNMTFIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIHVKFIGKSGHAAYPHQANDMVVAGAQFVNQIQTIVSRNVDPIQSVV 226          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_LACCB (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain BL23) GN=dapL PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG      EH+   K  ++  FQPAEE   G     + G       ++  +GLH  P+LP G +++R G L AG+      + GK GHAA+PQ++ D I+AA++ I  +Q +V+R   P DS V
Sbjct:  103 MTVALGILSYFAEHQP--KDNLIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAV 228          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_LACC3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain ATCC 334) GN=dapL PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.025e-15
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG      EH+   K  ++  FQPAEE   G     + G       ++  +GLH  P+LP G +++R G L AG+      + GK GHAA+PQ++ D I+AA++ I  +Q +V+R   P DS V
Sbjct:  103 MTVALGILSYFAEHQP--KDNLIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAV 228          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_PEDPA (Putative N-acetyldiaminopimelate deacetylase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dapL PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +    H+ +    ++  FQPAEE   G+ +   A +     + N  +GLH  P LP G +  R G L AG+      + GKGGHAA PQ + D ++A + +I  LQ +V+R  +P++  V
Sbjct:  105 MTVALGILEYFANHQPQ--DNLIFFFQPAEESHSGSVRAFNANIFTNQFRPNEFYGLHSTPTLPAGVIGCRMGTLFAGTTEVNLKLTGKGGHAAYPQDANDMVVAQAYLITQLQTIVARNVNPIEGGV 230          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRZT (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=dapL PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEAGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRGC (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=dapL PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 1
Query:   64 VVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+  G L AG+   +    GKGGHAA P  + D ++AAS  I  +Q +VSR  DP++  V
Sbjct:  119 LLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALIAASYFITQVQTIVSRNVDPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRSV (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus sanguinis (strain SK36) GN=dapL PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 1
Query:   64 VVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+  G L AG+   +    GKGGHAA P  + D ++AAS  I  +Q +VSR  DP++  V
Sbjct:  119 LLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRPS (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain CGSP14) GN=dapL PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
The following BLAST results are available for this feature:
BLAST of FC928999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_LACLS7.851e-1636.22Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLM7.851e-1636.22Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACS11.025e-1535.43Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACCB1.025e-1535.94Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACC31.025e-1535.94Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_PEDPA5.089e-1533.59Putative N-acetyldiaminopimelate deacetylase OS=Pe... [more]
DAPL_STRZT8.680e-1535.43Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRGC8.680e-1538.68Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRSV1.134e-1438.68Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPS1.134e-1435.43Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BG06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928999 ID=FC928999; Name=FC928999; organism=Citrus clementina; type=EST; length=377bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGT
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