FC928999

Overview
NameFC928999
Unique NameFC928999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length377
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..377. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRP7 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain 70585) GN=dapL PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPL 363
            +T+ LG  K L + + +     + +FQPAEE   G   + E     +   +  + LHV+P+LP+G +++R G L A +      + GKGGHAA P  + D +LAA+N+I   Q +VSR  DP+
Sbjct:  103 MTIGLGVLKELSQQQPD--NNFLFLFQPAEENEAGGMLMYEDHAFGEWLPDEFYALHVNPDLPVGTISTRVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDPV 223          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_LACF3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dapL PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.481e-14
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG       H+   K  ++  FQPAEE   G  +  E G+ E   + +  +GLH +P L  G +  R G L AG+   +  + GK GHAA PQ + D ++AA+ +I+ +Q ++SR  +P+++ V
Sbjct:  104 MTVALGVLDYFASHQP--KDNLLFFFQPAEESEAGGQRAYELGLFEGKWRPDEFYGLHDNPALKTGVIGCRLGTLFAGTTEVDIDVLGKDGHAAFPQEANDAVVAAAALIMQVQTIISRSINPVEAGV 229          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRSY (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 05ZYH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.526e-14
Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  V
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRS2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 98HAH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.526e-14
Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  V
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRZP (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain P1031) GN=dapL PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.298e-14
Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L  G+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFVGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRPN (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae GN=dapL PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.308e-14
Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.308e-14
Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGG-GGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREAD 357
            TML+GAA +L ++    +  V LVFQPAEE   GGA   + AG L+ V+ IF LH DP+L +G++++R GP+ + +      +   GGH A P  + D I A + ++  L  ++ R  D
Sbjct:  514 TMLMGAASVLTKYPPPTR--VRLVFQPAEETTPGGAVDTIAAGALDGVSKIFALHCDPHLEVGKLSTRTGPITSSNDSVTVRLWSAGGHTARPHLTGDLIHATAVLVTGLASVLDRRID 630          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRMU (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus mutans GN=dapL PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.626e-14
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            K  ++ +FQPAEE   G   + E G     + +  +GLHV P+  +G++A+    L AG+        GKGGHAA P ++ D ++AAS  I  +Q +VSR  DP++  V
Sbjct:  117 KNNLLFLFQPAEENEAGGMLMYEDGAFGNWQPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVFITFKGKGGHAAFPHNANDALVAASYFITQVQTIVSRNVDPIEGGV 225          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_LACLA (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. lactis GN=dapL PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.626e-14
Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  + + E +   +  ++ +FQPAEE   G   + +A   E    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  I  +Q +VSR  DPL S V
Sbjct:   99 MTVALGLLEKMSESQP--RDNLLFLFQPAEENEAGGKLMYDARAFENWLPDEFYGLHVRPDLKVGDIATNQHTLFAGTCEVELSFIGTGGHAAFPHTANDALVAAAYFITQVQTIVSRNVDPLASAV 223          
The following BLAST results are available for this feature:
BLAST of FC928999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_STRP71.134e-1435.43Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_ENTFA1.134e-1435.77Putative N-acetyldiaminopimelate deacetylase OS=En... [more]
DAPL_LACF31.481e-1433.59Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRSY2.526e-1434.65Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRS22.526e-1434.65Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRZP3.298e-1434.65Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPN4.308e-1434.65Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
CAAL4_RHOSR4.308e-1437.82Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]
DAPL_STRMU5.626e-1436.70Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACLA5.626e-1435.43Putative N-acetyldiaminopimelate deacetylase OS=La... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BG06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928999 ID=FC928999; Name=FC928999; organism=Citrus clementina; type=EST; length=377bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGT
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