FC928999

Overview
NameFC928999
Unique NameFC928999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length377
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..377. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRP4 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.253e-13
Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++ AS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVVASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRTD (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dapL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   V
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGV 225          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRT2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dapL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   V
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGV 225          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRT1 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dapL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   V
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGV 225          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRZJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain JJA) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRR6 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRPJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: DAPL_STRP2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=dapL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 43/127 (33.86%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 375
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  V
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAV 224          
BLAST of FC928999 vs. ExPASy Swiss-Prot
Match: AMHX_BACSU (Amidohydrolase amhX OS=Bacillus subtilis GN=amhX PE=3 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12
Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSL 330
            +TM LG   +L++  E  KGT+  +FQPAEE GGGA K++E GVL+ ++ ++G+HV P          P  L   S   E  I G+  H A P    + I  A+ ++  L
Sbjct:   96 MTMALGTLMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSILHGSSQHIEGTIIGEEAHGARPHLGKNSIEIAAFLVHKL 205          
The following BLAST results are available for this feature:
BLAST of FC928999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_STRP41.253e-1333.86Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRTD1.637e-1336.70Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT21.637e-1336.70Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT11.637e-1336.70Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRZJ2.792e-1333.86Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRR62.792e-1333.86Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPJ2.792e-1333.86Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPI2.792e-1333.86Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP22.792e-1333.86Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
AMHX_BACSU8.983e-1236.36Amidohydrolase amhX OS=Bacillus subtilis GN=amhX P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BG06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928999 ID=FC928999; Name=FC928999; organism=Citrus clementina; type=EST; length=377bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGT
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