FC929004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_YEAST (60S ribosomal protein L32 OS=Saccharomyces cerevisiae GN=RPL32 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = -3 Query: 266 DRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARL 577 DR V ENWR+ KGID VRR+F+G + P IGYGS+KKT+ P+G K F+V NV +LE L MH +TY AEIAHN+S K R I+ R L + VTN RL Sbjct: 23 DRYHRVAENWRKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23 Identity = 53/104 (50.96%), Postives = 75/104 (72.12%), Query Frame = -3 Query: 266 DRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARL 577 DR V ENWR+ KGID VRR+F+G + PNIGYGS+KKT+ P G+K ++V NV +L++L++H ++Y AEIA +VS++KR EIV + +L V VTN +L Sbjct: 24 DRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_CANGA (60S ribosomal protein L32 OS=Candida glabrata GN=RPL32 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.036e-22 Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = -3 Query: 266 DRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARL 577 DR V ENWR+ KGID VRR+F+G + P IGYGS+KKT+ P+G K +V N+ +LE L MH ++Y AEIAHNVS+K R ++ R L V VTN RL Sbjct: 24 DRYHRVSENWRKQKGIDSVVRRRFRGNISEPTIGYGSNKKTKFMSPSGHKVVLVSNLKDLETLTMHTKSYAAEIAHNVSSKNRVTLLARAKALGVKVTNAKGRL 127
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_ENCCU (60S ribosomal protein L32 OS=Encephalitozoon cuniculi GN=RPL32 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.235e-19 Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = -3 Query: 248 DRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 577 DR VK +WRRP GID +VR++ KG MP+I Y K+ RH LPNG +K + N+N+L L NR YC EIAH V +KR IV R +L + + N ARL + EE Sbjct: 30 DRYKRVKPSWRRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARLIPEIEE 139
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_PYRFU (50S ribosomal protein L32e OS=Pyrococcus furiosus GN=rpl32e PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14 Identity = 42/90 (46.67%), Postives = 56/90 (62.22%), Query Frame = -3 Query: 281 WRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 550 WRRPKGID ++R K KG P+IG+ S K R P+G+++ +VHNV ELE L + A IAH V KKR EI++R +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYEEVLVHNVKELEAL--DPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLN 127
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_PYRHO (50S ribosomal protein L32e OS=Pyrococcus horikoshii GN=rpl32e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = -3 Query: 281 WRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 550 WRRPKGID ++R K KG P+IG+ S + R P+G+++ ++HNV ELE L R A IAH V KKR EI++R +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELERL--DPRRQAARIAHTVGKKKRIEILKRAEELGIKVLN 127
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_TRIHA (60S ribosomal protein L32 OS=Trichoderma harzianum GN=rpl32 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13 Identity = 43/89 (48.31%), Postives = 53/89 (59.55%), Query Frame = -3 Query: 329 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELL----MMHNRTYCAEIAHNVSTKKR 583 Q DR V +WR+PKGID RVRR+F+G + MP IGYGS+KKTR P+G F +HN L M AEIA VS++KR Sbjct: 22 QSDRFDRVGSSWRKPKGIDGRVRRRFRGTIRMPKIGYGSNKKTRFLTPSGHNAF-LHNARTLSCAAGCSMQSTDPSAAEIATPVSSRKR 109
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_PYRAB (50S ribosomal protein L32e OS=Pyrococcus abyssi GN=rpl32e PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13 Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = -3 Query: 281 WRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 550 WRRPKGID ++R K KG P+IG+ S + R P+G+++ ++HNV ELE L + A IAH V KKR EI++R +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELEKL--DPKRQAARIAHTVGKKKRIEILKRAQELGIKVLN 127
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_METKA (50S ribosomal protein L32e OS=Methanopyrus kandleri GN=rpl32 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13 Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = -3 Query: 281 ENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 556 E WRRPKG ++RRK K MPN GYGS KK R P+G+++ +V+N +LE + + A IA V +KR+EI+E+ +L +VV N Sbjct: 41 EKWRRPKGRHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDLE--KIDPKRQAARIASRVGRRKRQEILEKAEELGIVVLN 130
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_THESM (50S ribosomal protein L32e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl32e PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = -3 Query: 281 WRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 550 WR+PKG D ++R K KG P+IG+ S K R P+G+++ +V+NV +LEL+ ++ A IA V KKR I+ER +L + V N Sbjct: 38 WRKPKGTDSKMRVKLKGKARSPSIGWSSPKAVRGLHPSGYEEVLVYNVKDLELI--DSKRQAARIAATVGKKKRIMIIERARELGIKVLN 125 The following BLAST results are available for this feature:
BLAST of FC929004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929004 ID=FC929004; Name=FC929004; organism=Citrus clementina; type=EST; length=684bpback to top |