FC929004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_THEGJ (50S ribosomal protein L32e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11 Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 281 WRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 550 WRRPKGID ++R K KG P+IG+ S + R P+G+++ +VHNV ELE + A IA V +KR+ I+ R +L + V N Sbjct: 38 WRRPKGIDSKMRLKKKGKPRSPSIGWSSPRAVRGLHPSGYEEVLVHNVKELEAI--DPTRQAARIARTVGARKREAIIARAKELGIKVLN 125
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_THEON (50S ribosomal protein L32e OS=Thermococcus onnurineus (strain NA1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11 Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 281 WRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 550 WRRPKGID ++R K KG P+IG+ S + R P+G+++ +VHNV ELE + A IA V +KR+ I+ R +L V V N Sbjct: 38 WRRPKGIDSKMRLKKKGKARSPSIGWSSPRLVRGLHPSGYEEVLVHNVKELEAI--DPARQAARIARTVGARKREMILARAKELGVKVLN 125
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_PYRKO (50S ribosomal protein L32e OS=Pyrococcus kodakaraensis GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11 Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 281 WRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTN 550 WRRPKGID ++R K KG P+IG+ S K R P+G+++ +VHNV ELE + A IA V +KR+ I+ R +L V V N Sbjct: 38 WRRPKGIDSKMRLKKKGKPRSPSIGWSSPKAVRGLHPSGYEEVLVHNVKELEAI--DPTRQAARIAGTVGARKREMILARAKELGVKVLN 125
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_SULSO (50S ribosomal protein L32e OS=Sulfolobus solfataricus GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = -3 Query: 278 KISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNK 571 ++ +E WRRP G D + R K +G + ++GY KK R + P+G ++ +VHNVNEL + I+ +V KKR EI+ + +L + V+N+ Sbjct: 37 RLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKKVRGFHPSGLRQVIVHNVNELVKVQNQKDNVIVTISSSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_MAIZE (60S ribosomal protein L32 (Fragment) OS=Zea mays GN=RPL32 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11 Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = -3 Query: 248 TYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 373 TYCAEIAHNVSTKKRKEIVER AQL +VV KLAR SQE+E Sbjct: 1 TYCAEIAHNVSTKKRKEIVERAAQLDIVVPTKLARAPSQEDE 42 The following BLAST results are available for this feature:
BLAST of FC929004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929004 ID=FC929004; Name=FC929004; organism=Citrus clementina; type=EST; length=684bpback to top |