FC929016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929016 vs. ExPASy Swiss-Prot
Match: ACOD_CYPCA (Acyl-CoA desaturase OS=Cyprinus carpio PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 51/165 (30.91%), Postives = 76/165 (46.06%), Query Frame = 2 Query: 338 MHLLALFAPFCF------TWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDK--DSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWG 808 +HL AL+ F F TW + F ++ LGIT HR SHRS+K L+ A + Q + +W HR HH++ +++ DPH+ + GF+FSH+ WL + V+E+ G + DL+ F R Y P P+ VWG Sbjct: 49 LHLGALYGLFLFPSARALTW----IWFFGCLLFSALGITAGAHRLWSHRSYKASLPLQIFLALGNSMAFQNDIYEWSRDHRVHHKYSETDADPHNAVRGFFFSHVGWLLVRKHPDVIEK-GRKLELSDLKADKVVMFQRRFY--KPSVLLMCFFVPTFVPWYVWG 206
BLAST of FC929016 vs. ExPASy Swiss-Prot
Match: SCD5_HUMAN (Stearoyl-CoA desaturase 5 OS=Homo sapiens GN=SCD5 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.469e-13 Identity = 49/175 (28.00%), Postives = 80/175 (45.71%), Query Frame = 2 Query: 290 RNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKD--SVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWG 808 RN + + G V ++ L+ P W A+ +++ L G+T HR SHRS++ L A + Q + +W HR HH++ +++ DPH+ GF+FSH+ WLF + V+E+ G +V DL P R R Y + + P+ +WG Sbjct: 48 RNVVLMSLLHLGAVYSLVLIPKAKPLTLLW-----AYFCFLLAAL-GVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQNDIFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEK-GRKLDVTDLLADPVVRIQRKYYKISVV--LMCFVVPTLVPWYIWG 213
BLAST of FC929016 vs. ExPASy Swiss-Prot
Match: ACOD1_RAT (Acyl-CoA desaturase 1 OS=Rattus norvegicus GN=Scd1 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.211e-13 Identity = 43/143 (30.07%), Postives = 62/143 (43.36%), Query Frame = 2 Query: 407 YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGMVRKHFPF 832 Y + LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL K ++ GG ++ DL+ + F R Y P P+ WG H F Sbjct: 106 YYLISALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYY--KPGLLLMCFILPTLVPWYCWGETFLHSLF 246
BLAST of FC929016 vs. ExPASy Swiss-Prot
Match: ACOD_MESAU (Acyl-CoA desaturase OS=Mesocricetus auratus GN=SCD PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.565e-12 Identity = 40/136 (29.41%), Postives = 59/136 (43.38%), Query Frame = 2 Query: 404 LYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF-DKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWG 808 +Y V + GI HR SHR++K L + Q + +W HR HH+F ++ DPH GF+FSH+ WL K ++ GG ++ DL+ + F R Y P P+ WG Sbjct: 101 VYYVISIEGIGAGVHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETYADPHDSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYY--KPAILLMCFILPTFVPWYFWG 234
BLAST of FC929016 vs. ExPASy Swiss-Prot
Match: ACO1_YEAST (Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae GN=OLE1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11 Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 2 Query: 407 YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYIL 745 Y G + IT +HR SHRS+ L +A G S++G+ W +HR HH++ D+ RDP+ G W+SHM W+ K + + ++ D+ RF YIL Sbjct: 148 YYAVGGVSITAGYHRLWSHRSYSAHWPLRLFYAIFGCASVEGSAKWWGHSHRIHHRYTDTLRDPYDARRGLWYSHMGWMLLKPNPKYKARA--DITDMTDDWTIRFQHRHYIL 258 The following BLAST results are available for this feature:
BLAST of FC929016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929016 ID=FC929016; Name=FC929016; organism=Citrus clementina; type=EST; length=844bpback to top |