FC929031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.213e-20 Identity = 77/278 (27.70%), Postives = 120/278 (43.17%), Query Frame = 2 Query: 14 QYGLFKETSDHLLYPNPGSGMIHEQHLQF----FHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSA-TCMNLLKLP 832 +YG+F +YP S M +F + F G+L ++F + ++PF KL + L DL L P+L ++L L E D E F I N + ++ + L+P G +I V N ++ N+ N ++ F RGF ++ +D I +F+ E + N Y GY+S H I MFW+ +LE +KKFL F+TG R + ++ FC E +R P A TC ++L LP Sbjct: 741 EYGMF-------MYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGD--NFEEVFYIHFNVHWDRNDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIKLFHPEELKDVIVGNTDYDWKTFEK-NARYEPGYNSSHPTIVMFWKAFHKLTLEEKKKFLVFLTGTDRLQMKDLNNMKITFC-------CPESWNERDPIRALTCFSVLFLP 1001
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.027e-19 Identity = 80/282 (28.37%), Postives = 124/282 (43.97%), Query Frame = 2 Query: 50 LYPNPGSGMIHEQH-LQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLK------------HYEADISELELYF-------VILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPP 835 L+P P SG LQ F LG ++AKA+ +G ++D+P + F + + D+ +DPEL + L+ L+ H ++ ++ +L F + L T+ +L P N V +N+ +I + N + I++Q F GF Q+ + + +FNE E + + GY S +E ++L F E Q+ FL+FVTG R P G L P I R GS S + LP+ TC N LKLPP Sbjct: 1198 LFPRPWSGTSTTSDVLQKFVLLGTVVAKALQDGRVLDLPLSKAFYKLILGQELSSFDIHFVDPELCKTLVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPYSANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEELETMLCGECDLFSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGSPRLPHGGLASLSPKLTIVRKHGSDSSDT--DLPSVMTCANYLKLPP 1477
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18 Identity = 72/278 (25.90%), Postives = 124/278 (44.60%), Query Frame = 2 Query: 47 LLYPNPGSGMIH-EQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYN-YLNDLPS-----------LDPELYRHLIFLKHYEAD---ISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLP 832 LL+P P + + E+ ++ F +LG +A+++ + ++D F+ F L R + +PS +DP L + L ++ + D + L L F + N+ + EL+PGG N + + NV +IH V + L I +Q F+ GF ++ + + + E N N GY + +I F ++ +F ++ FL+F+TG + P+ GFK L P F + A + LP+ TC N LKLP Sbjct: 1185 LLFPEPLNPFSNNEKVIELFGYLGTFVARSLLDNRILDFRFSKVFFELLHRMSTPNVTTVPSDVETCLLMIELVDPLLAKSLKYIVANKDDNMTLESLSLTFTVPGND-----DIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKHAEDGLTADEYLPSVMTCANYLKLP 1457
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.639e-17 Identity = 80/270 (29.63%), Postives = 117/270 (43.33%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYL--NDLPSLDPELYRHLIFL-------KHYEADISELE---LYFVILNNEYGEQTEE-------------ELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHE-XXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLP 832 F FLG L+AKA+ + LVD+P F + R+ L +DL +DP + R + L K E D S+ + Y + G E+ EL GGK+I VT N+ ++ LV LN + +Q F GF+ + + F E + GY + ++ +E+L SF E Q+ FL+FVTG R P+ GF+ L P I R ++E D LP+ TC+N LKLP Sbjct: 1697 FRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP 1966
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.639e-17 Identity = 79/261 (30.27%), Postives = 111/261 (42.53%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNY--------------LNDLPSLDPELYRHLIFLKHYEADISELELY--FVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPP 835 F +GIL+ A++ I +DI F KL ++DL + PEL L L YE ++ E + Y F + E+G L PGG I VTN+N ++ L ++ LN I +Q + F GF + + + + E R +T Y GY I FW+V+ F LE QKK L F TG R P+ G L F I S +E + + LP + TC N L LPP Sbjct: 500 FRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSYEGNVEE-DFYSTFQVFQEEFGVIKSYNLKPGGDKIPVTNQNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQR-STQY-DGYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADLN--FKI-----SKNETSTNWLPVAHTCFNQLCLPP 750
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.769e-17 Identity = 69/269 (25.65%), Postives = 111/269 (41.26%), Query Frame = 2 Query: 32 ETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEE------ELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXX-RQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMN 817 E+ +H L GS + ++ G++L A++ ++D+ F F K+ + +ND L PE +++ + Y+ + E +++ + + ++ +E +L P G VT EN + L + LN I F GF +I+ + +F E R T Y GG+ V++ FWE+L Q+K L FVTG R P G + F I R A DRLP S TC N Sbjct: 555 ESIEHELLQGEGSSS------ELYYLFGVVLGLAIYNSTILDLKFPRAFYKKICGEVLSVNDFLELYPETGTNMLKMLEYDGEDFE-DIFALTFETCFPDRFDESKIHYRQLCPDGSTQAVTRENKHEYFRLWMDFYLNRSIAPGFESFRNGFFHVIEGNSFRLFGSEELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIP--FRISRIRSGA-----DRLPLSHTCFN 809
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.769e-17 Identity = 75/278 (26.98%), Postives = 123/278 (44.24%), Query Frame = 2 Query: 14 QYGLFKETSDHLLYPNPGSGMIHE-----QHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLP 832 +YG+F +YP GS M + ++F F G+L ++F + ++PF KL + L DL L P L + L + AD ++ I + + +Q + +L+P G +I V N ++ ++ N ++ F RGF ++ +K+ + F E QN+ Y GY H I++FW+ +L+ +KKFL F+TG R G + +E +F R + SE PTS TC N+L LP Sbjct: 732 EYGMF-------MYPEMGSCMWFPAKPKPEKKRYFLF-GMLCGLSLFNLNVANLPFPLALYKKLLDQKPSLEDLKELSPRLGKSLQEVLDDAAD--DIGDALCIRFSIHWDQNDVDLIPNGISIPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIGNTDYDWKQF-EQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHARGIQKMEIVF---RCPETFSER---DHPTSITCHNILSLP 992
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.769e-17 Identity = 78/261 (29.89%), Postives = 113/261 (43.30%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKL------KRKYNY--------LNDLPSLDPELYRHLIFLKHYEADISELELY--FVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPP 835 F +GIL+ A++ I +DI F KL N ++DL + PEL L L +E ++ E + Y F + E+G L PGG I VTN+N ++ L ++ LN I +Q + F GF + + + + E R +T Y GY I+ FW+V+ F L+ QKK L F TG R P+ G L F I S +E + + LP + TC N L LPP Sbjct: 502 FRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICSVTVDDLCQIMPELAHGLSELLSHEGNVEE-DFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQR-STQY-DGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLN--FKI-----SKNETSTNCLPVAHTCFNQLCLPP 752
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.769e-17 Identity = 78/261 (29.89%), Postives = 113/261 (43.30%), Query Frame = 2 Query: 101 FHFLGILLAKAMFEGILVDIPFATFFLSKL------KRKYNY--------LNDLPSLDPELYRHLIFLKHYEADISELELY--FVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPP 835 F +GIL+ A++ I +DI F KL N ++DL + PEL L L +E ++ E + Y F + E+G L PGG I VTN+N ++ L ++ LN I +Q + F GF + + + + E R +T Y GY I+ FW+V+ F L+ QKK L F TG R P+ G L F I S +E + + LP + TC N L LPP Sbjct: 502 FRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEE-DFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQR-STQY-DGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLN--FKI-----SKNETSTNCLPVAHTCFNQLCLPP 752
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15 Identity = 78/283 (27.56%), Postives = 122/283 (43.11%), Query Frame = 2 Query: 71 GMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPEL------YRHLIFLKHY--------EADISELELYFVILNNEYGEQT----EEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGS----------ASEEALDRLPTSATCMNLLKLPP 835 G H+ +++F LG ++AKA+ +G L+D+P +T F + + L+D+ D EL R ++ KHY + IS+L L + + E T E +L G I V N+ +I LV + + + +Q F GF Q+ + +F E ++ + GY+++ I E++ + + Q+ F +FVTG R P G L P I R S ASE A D LP+ TC N LKLPP Sbjct: 1583 GQFHKV-IEYFRLLGRVMAKALQDGRLLDVPLSTAFYKLILGQELDLHDIVLFDAELGKTLQELRVVVARKHYLEGVGGDNSSTISDLCLRGCRIEDLSLEFTLPGYPEYILRSGDEI-VDITNLEEYISLVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTSSAAANGAGASETADDDLPSVMTCANYLKLPP 1863 The following BLAST results are available for this feature:
BLAST of FC929031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929031 ID=FC929031; Name=FC929031; organism=Citrus clementina; type=EST; length=835bpback to top |