FC929031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15 Identity = 70/269 (26.02%), Postives = 108/269 (40.15%), Query Frame = 2 Query: 56 PNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEAD----ISELELYFVILNNEY--------GEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQK-DWINMFN--EHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMN 817 PN L+ ++ G+++ A+F ++D+ F KL + D L PE R+LI + +Y D + L NN + E EL G+N+ +T N F+ L I Q + F+ GF+++ + + I +FN E E R T YVGG+ + + FWE+++S+ QKK L+FVT R P G + F I S D LP + TC N Sbjct: 600 PNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDLQFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEYVTVELCENGRNVPITQSNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATGISTIP--FKISLLGSHDS----DDLPLAHTCFN 862
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: UPL5_ARATH (E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana GN=UPL5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15 Identity = 74/287 (25.78%), Postives = 116/287 (40.42%), Query Frame = 2 Query: 5 FDVQYGLFKETSDHL--LYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE----LELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQ-----KDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLP 832 F+ + LF ++D PNP S + H FF F G ++A A+ + V + F F +L L D+ D +Y + + + + L L FV+ E G++ EL P GK V ++N ++ L+ R I +Q F RGF ++ + + + + +T Y G+ I+ FW++LK + E Q+ L F T P+ GF+ L I R EA DRLP S TC L +P Sbjct: 567 FNPKNTLFLRSADDFRRFSPNPAS-KVDPLHPDFFEFTGRVIALALMHKVQVGVLFDRVFFLQLAGLKISLEDIKDTDRIMYNSCKQILEMDPEFFDSNAGLGLTFVLETEELGKRDTIELCPDGKLKAVNSKNRKQYVDLLIERRFATPILEQVKQFSRGFTDMLSHSVPPRSFFKRLYLEDLDGMLRGGENPISIDDWKAHTEY-NGFKETDRQIDWFWKILKKMTEEEQRSILFFWTSNKFVPVEGFRGLSSKLYIYRL-----YEANDRLPLSHTCFYRLCIP 846
BLAST of FC929031 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.215e-14 Identity = 65/274 (23.72%), Postives = 118/274 (43.07%), Query Frame = 2 Query: 50 LYPNP----GSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLK---------HYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLP 832 L+P+P GS +E+ + F LG +A+++++ ++ I F F ++ ++ + +D L L +L+ + E DI +L+ L+ EL+P G + VT NV +++ V ++ + ++QQ F GF + + + EHE ++ GY E I+ ++ + + Q+ FL+F+TG + P+ GF L P + R D LP+ TC+N LKLP Sbjct: 1353 LFPSPIPLLGSSPENERKISLFFALGQFVARSIYDSRIISIQFNPLFFAR--NIPLTISSVAKVDKGLANSLRYLEKLIPGKNPTNAETDIKLEDLH---LDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKLP 1621 The following BLAST results are available for this feature:
BLAST of FC929031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929031 ID=FC929031; Name=FC929031; organism=Citrus clementina; type=EST; length=835bpback to top |