FC929062

Overview
NameFC929062
Unique NameFC929062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length826
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:36..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.579e-81
Identity = 162/247 (65.59%), Postives = 187/247 (75.71%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPG-SEAPKVTPDVIAEHTVRALQRTM 825
            EL +NA+ I  PGKG+LAADEST TIGKR ++IN+EN E NRRA RELLF T P   +++SGVILF ET+YQKT  GKPFV++L+E GVLPGIKVD G V L GT  E TTQGLD LAQRC +YY  G RFAKWR VLKI  + PS LA+ ENAN LARYA ICQ+NGLVPIVEPE+L DG HD++    VTE+VL+  YKAL DHHV LEGTLLKPNMVT G S   K + +  A  TV ALQRT+
Sbjct:   15 ELRENASAIVAPGKGLLAADESTNTIGKRFAAINLENTEENRRAYRELLFTTDPEFAKHISGVILFHETVYQKTKDGKPFVELLRERGVLPGIKVDLGVVPLGGTADECTTQGLDNLAQRCAQYYNDGCRFAKWRCVLKISSHNPSYLAMLENANVLARYAFICQQNGLVPIVEPEVLPDGDHDLETAQRVTEQVLSFVYKALADHHVYLEGTLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 300.827 bits (769), Expect = 6.001e-81
Identity = 157/242 (64.88%), Postives = 182/242 (75.21%), Query Frame = 1
Query:  106 AAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            A  I   GKGILAADES GT+G RL  INVEN E NRRA RE+LF +  ++ + + GVILF ETLYQK ++GKPF  ++KE G++ GIK+D GT  LAGTNGETT QGLD LA+RC +Y + GA F KWRAVLKI    PSQLAI ENAN LARYA ICQ+NGLVPIVEPE+L DG HD+++C  VTE+VLAA YKALNDHHV LEGTLLKPNMVT G   P K TP  +A  TV  L RT+
Sbjct:   20 AQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASICQQNGLVPIVEPEVLPDGDHDLQRCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHSCPKKYTPQDVAVATVTTLLRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.337e-80
Identity = 158/247 (63.97%), Postives = 185/247 (74.90%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQK   G PF  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAACYKAL+DHHV LEGTLLKPNMVT G   P K +   IA  TV AL+RT+
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 298.13 bits (762), Expect = 3.890e-80
Identity = 159/247 (64.37%), Postives = 184/247 (74.49%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            EL   A  I TPGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  +++ G+L GIKVDKG V LAGT+GETTTQGLDGL +RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K +P+ IA  TV AL+RT+
Sbjct:   15 ELSDIALRIVTPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQYKKDGADFAKWRCVLKISDRTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 297.36 bits (760), Expect = 6.635e-80
Identity = 159/247 (64.37%), Postives = 183/247 (74.09%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  ++E G+L GIKVDKG V LAGT+GETTTQGLDGL +RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K +P+ IA  TV AL+RT+
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQEKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQYKKDGADFAKWRCVLKISDRTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQFVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 297.36 bits (760), Expect = 6.635e-80
Identity = 158/247 (63.97%), Postives = 184/247 (74.49%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  +++ G++ GIKVDKG V LAGT+GETTTQGLDGL++RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K TP+ IA  TV AL+RT+
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 6.635e-80
Identity = 158/247 (63.97%), Postives = 184/247 (74.49%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  +++ G++ GIKVDKG V LAGT+GETTTQGLDGL++RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K TP+ IA  TV AL+RT+
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.635e-80
Identity = 157/247 (63.56%), Postives = 185/247 (74.90%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQ T  G  F  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAACYKAL+DHHV LEGTLLKPNMVT G   P K + + IA  TV AL+RT+
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDGTNFAQLIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISDTTPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGEHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLLKPNMVTAGHSCPTKYSSEEIAMATVTALRRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 1.132e-79
Identity = 156/247 (63.16%), Postives = 183/247 (74.09%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTM 825
            EL   A  I  PGKGILAADESTGT+GKR  +INVEN+E NRR  R++LF T  ++   + G+I F ETLYQK++ GK F  V+KE G++ GIKVDKGT  L GT+ ETTTQGLDGL++RC +Y + G  FAKWR VLKI    P  LAI ENAN LARYA ICQ NGLVPIVEPEIL DG HD+++C   TE+VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K TP  +A  TV AL+RT+
Sbjct:   15 ELSDIAQRIVAPGKGILAADESTGTMGKRFQNINVENIEENRRCFRDILFSTDASIANCVGGIIFFHETLYQKSSNGKLFPQVVKEKGIVVGIKVDKGTAPLMGTDKETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKISDGCPFALAIAENANVLARYASICQMNGLVPIVEPEILPDGDHDLQRCQYATEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHSCPKKFTPQEVAMATVTALRRTV 261          
BLAST of FC929062 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.478e-79
Identity = 160/247 (64.78%), Postives = 182/247 (73.68%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTM 825
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV LEGTLLKPNMVTPG     K + + IA  TV AL+RT+
Sbjct:   15 ELADIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTV 261          
The following BLAST results are available for this feature:
BLAST of FC929062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF_ECHMU1.579e-8165.59Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALDOB_CHICK6.001e-8164.88Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOC_CARAU1.337e-8063.97Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDOC_MOUSE3.890e-8064.37Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOC_RAT6.635e-8064.37Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_MACFA6.635e-8063.97Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN6.635e-8063.97Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDCB_DANRE6.635e-8063.56Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOB_SPAAU1.132e-7963.16Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOA_RAT1.478e-7964.78Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH3CA11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CA11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929062 ID=FC929062; Name=FC929062; organism=Citrus clementina; type=EST; length=826bp
GGCACGAGGCTCTGTTTCTCCCTCTAACAAAACAAATTTTCTATCTTCAA
GTCGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGATGAGCTCATTA
AAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGAT
GAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATCAATGTTGAGAA
TGTTGAGTCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCG
GTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTAC
CAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGG
AGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTA
CCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGC
CAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCT
TAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCA
ATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCC
ATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATCAAGAAGTG
TGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATG
ACCACCATGTCCTTCTTGAGGGTACCCTTTTGAAGCCCAACATGGTGACC
CCTGGATCTGAAGCTCCCAAAGTTACACCGGACGTGATTGCTGAACACAC
TGTCCGGGCCCTGCAACGCACTATGC
back to top