FC929070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_GLOVI (50S ribosomal protein L1 OS=Gloeobacter violaceus GN=rplA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 SKR ++ + + Y + A+ LLKQ ++ KF ETAE H RL I+PKY DQQ+R+TV LP+GTGK Sbjct: 5 SKRLKALREQVDRQTIYAPQKALELLKQTANAKFDETAETHIRLGINPKYADQQVRSTVVLPRGTGK 71
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_CALS8 (50S ribosomal protein L1 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 2 Query: 524 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 R K++ E L + K YD + AI L + S KF ET E H RLN+DP++ DQQ+R TV LP GTGK Sbjct: 3 RGKKYQEAAKLVDKTKLYDPEEAIDLALKTSYAKFDETVEVHVRLNVDPRHADQQVRGTVVLPNGTGK 70
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_BACSU (50S ribosomal protein L1 OS=Bacillus subtilis GN=rplA PE=3 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 524 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 + K+++E L + K YD+ A++L+K+ ++ KF T E FRL +DP+ NDQQ+R V LP GTGK Sbjct: 4 KGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRLGVDPRKNDQQIRGAVVLPNGTGK 71
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_ANATD (50S ribosomal protein L1 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 2 Query: 524 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 R K++ E L + K YD + AI L + S KF ET E H RLN+DP++ DQQ+R TV LP GTGK Sbjct: 3 RGKKYQEAAKLVDKTKLYDPEEAIELALKTSYAKFDETVEVHVRLNVDPRHADQQVRGTVVLPNGTGK 70
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RK1_RHDSA (50S ribosomal protein L1, chloroplastic OS=Rhodomonas salina GN=rpl1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 S+R +IQ E + Y A++LLK++++ KFTETAEAH L ID KY DQQLR T+ LPKGTGK Sbjct: 5 SQRVKKIQTKVE-LRPYKGTEALNLLKELATAKFTETAEAHISLKIDTKYADQQLRTTLVLPKGTGK 70
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RK1_GUITH (50S ribosomal protein L1, chloroplastic OS=Guillardia theta GN=rpl1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 SKR E++N E K Y A++LLK ++ KF E+AEAH L +D KY DQQLR T+ LPKGTGK Sbjct: 5 SKRISEVRNKIENKP-YKAIEALNLLKDTATAKFVESAEAHIALKLDTKYADQQLRTTLVLPKGTGK 70
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_PHYAS (50S ribosomal protein L1 OS=Phytoplasma australiense GN=rplA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 2 Query: 524 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 RSK++L + + + KK Y L+ AI L KQ TKF T E F LN+DPK DQ LR + LP GTGK Sbjct: 3 RSKKYLAVSQMFDIKKRYPLQEAIKLTKQSQITKFDATVECAFHLNLDPKKADQNLRGALVLPHGTGK 70
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_DEIRA (50S ribosomal protein L1 OS=Deinococcus radiodurans GN=rplA PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 29/66 (43.94%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 530 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 KR+ ++ + K+Y + A +L+K++++ KF ET E HFRL IDP+ +DQ +R TV+LP GTG+ Sbjct: 6 KRYRALEGKVDRNKQYSIDEAAALVKELATAKFDETVEVHFRLGIDPRKSDQNVRGTVALPHGTGR 71
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_ACAM1 (50S ribosomal protein L1 OS=Acaryochloris marina (strain MBIC 11017) GN=rplA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 S+R E++ E + Y+ A+ LL + ++ KF E+AEAH RL IDPKY DQQLR TV+LPKGTG+ Sbjct: 6 SRRMRELKQQVEDRA-YEPLEALELLCKTATAKFPESAEAHIRLGIDPKYTDQQLRTTVALPKGTGQ 71
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_PROM4 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 SKR + + E + Y AI+L+K+ S+ KF ET EAH RL IDPKY DQQ+R TV+LP GTG+ Sbjct: 5 SKRMASLSSKIEDRA-YPPLEAINLVKESSTAKFDETIEAHVRLGIDPKYTDQQIRTTVTLPNGTGQ 70 The following BLAST results are available for this feature:
BLAST of FC929070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929070 ID=FC929070; Name=FC929070; organism=Citrus clementina; type=EST; length=728bpback to top |