FC929080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929080 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 60/131 (45.80%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 352 LLFIIRIRGINAVDPKTK--KILQLLRLRQIFNGVFLKVNKAPLNMLHRVEPYVTYGYPNLKSVKELIYKRGF------GKLNKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 720 LLFI+R+RG AV+ K KIL LLRL + GVF+K+ K +L + PYV G P+L S++ LI KRG + I L DN I+E+ G HGIIC+ED I EI T+G F N FL PF Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271
BLAST of FC929080 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.107e-19 Identity = 57/136 (41.91%), Postives = 79/136 (58.09%), Query Frame = -1 Query: 352 EAKLLFIIRIRGINAVD--PKTKKILQLLRLRQIFNGVFLKVNKAPLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQR--------IALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 729 E LLF+IR++G AV K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S++ LI KR ++ QR I L DN I+E+ G G+IC+ED I EI T+G +F + FL PF Sbjct: 134 EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKR--SRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267
BLAST of FC929080 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19 Identity = 52/136 (38.24%), Postives = 80/136 (58.82%), Query Frame = -1 Query: 352 NPEAKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKAPLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQ------RIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 735 N E +LLF++R++G A + K +IL LRL ++ VF+K+ + ++L + PYV G P+LKS++ LI KR ++ I L DN I+E+ G G+IC++D I EI T+G +F + N FL PF Sbjct: 131 NGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266
BLAST of FC929080 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.224e-18 Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = -1 Query: 352 AKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKAPLNMLHRVEPYVTYGYPNLKSVKELIYKRG------FGKLNKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 726 A LLF++R+RG A + K ++L LLRL ++ GVF+++ +L V PYV G P+L S++ L+ KR G+ + L DN ++E+ G G+IC+ED I EI T+G F + N FL PF Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242
BLAST of FC929080 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.088e-18 Identity = 52/168 (30.95%), Postives = 93/168 (55.36%), Query Frame = -1 Query: 244 FYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKAPLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN-PYVEGGDAGNREDYINELIRRM 744 FYV EA+ +I IR PK +K+L+L RL++I V ++ NK+ ML ++ +V +G ++ +++L+Y +G G+ R+ LT+ FI + G+ I C+E+ + I FK+ N+FL+PF +++ + +GG GN +D ++ L+ RM Sbjct: 73 FYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238
BLAST of FC929080 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.767e-17 Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = -1 Query: 352 AKLLFIIRI----RGINAVDPKTKKILQLLRLRQIFNGVFLKVNKAPLNMLHRVEPYVTYGYPNLKSVKELIYKRGF-----GKLNKQRIA-LTDNFIIEQAFGQH-GIICMEDFIPEILTVGPHFKEANNFLWPF 726 AKLLFIIRI +G+ V K +K+L LLRL + GVF+K+ A + +L + PY+ G P+L S+++L KR + + RI L +N ++E FG G IC+ED I E+ T+G HFK +N++ PF Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226
BLAST of FC929080 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.388e-14 Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = -1 Query: 352 LLFIIRIRG-INAVDP-KTKKILQLLRLRQIFNGVFLKVNKAPLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKL------NKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 720 L I+R G + A P K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++V++L+ KR + +++ L DN ++E+ G GIIC+ED I E + FK +FL PF Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162 The following BLAST results are available for this feature:
BLAST of FC929080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929080 ID=FC929080; Name=FC929080; organism=Citrus clementina; type=EST; length=744bpback to top |