FC929106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTD------NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSS---STVKQRPA 435 +S + RLQ+E +W+ + P GF K +LQ+W + G GT +A + + V++P YP + P+V F P HP++Y +G ICL IL + W PA+T+ + + + +L S ++ Q PA Sbjct: 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKF-PAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPA 133
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ + + P G + DN+ W + G T Y + TF L ++F E YP + P V FL HP++Y+NG ICLDIL + W+P V+S+ SI S+ + Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEM-FHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFN 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PPAG DN + W + G T + TF+L + F E YP + P V F+ HP+IY++G ICLDIL + WSP V+++ SI S+L Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 113
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ + + P G + DN+ W + G T Y + TF L ++F E YP + P V FL HP++Y+NG ICLDIL + W+P V+S+ SI S+ + Sbjct: 1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEM-FHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFN 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ + + P G + DN+ W + G T Y + TF L ++F E YP + P V FL HP++Y+NG ICLDIL + W+P V+S+ SI S+ + Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEM-FHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFN 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SN ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNDSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S + RL ++ +PP G DNL W + G T + + TF+L + F E YP + P V FL HP++Y+NG +CLDIL + WSP V+++ SI S+L Sbjct: 1 MSTPSKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKM-FHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLL 113
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ + + P G + DN+ W + G T Y + TF L ++F E YP + P V FL HP++Y+NG ICLDIL + W+P V+S+ SI S+ + Sbjct: 1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEM-FHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFN 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ +EL + Q +PPA +++ W + G + Y+ F + +DF YP + P+V F HP+I S G ICLDIL + WSPA T S V +SI S+L+ Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKV-YHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLT 112
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.629e-13 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PPAG DN + W + G T + TF+L + F E YP + P V F+ HP+IY++G ICLDIL + WSP V+++ SI S+L Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 113 The following BLAST results are available for this feature:
BLAST of FC929106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929106 ID=FC929106; Name=FC929106; organism=Citrus clementina; type=EST; length=767bpback to top |