FC929193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.172e-17 Identity = 50/111 (45.05%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+QKEL + Q +PPA V D+L W + G P + Y F L V FP YP + P++ F HP+I SNG ICLDIL WSPA+TVS V +SI S+L Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 25 VEAMTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTV 420 V A + PS A RLQ+EL+ ++ G +DNL +W+ ++GA GT+Y + ++L ++FP YP AP V FL P HP++ + G+ICLDIL D WS V ++ +SI S+L + Sbjct: 13 VTAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC-YHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNI 144
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 25 VEAMTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTV 420 V A + PS A RLQ+EL+ ++ G +DNL +W+ ++GA GT+Y + ++L ++FP YP AP V FL P HP++ + G+ICLDIL D WS V ++ +SI S+L + Sbjct: 13 VAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC-YHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNI 144
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.066e-17 Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSS 414 R+ KEL + +PP+ V D+L W + G P + YA F L + FP YP++ P++ L HP+I SNG+ICLDIL D WSPA+T+S V +SI S+L+ + Sbjct: 5 RINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIA-LTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDA 113
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.229e-17 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 79 ASNRLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 ++ R+QKEL E ++PP AG K DNL W+ + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 87 SAKRIQKELAEITLDPPPNCSAGPKG---DNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 202
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 9.229e-17 Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ KEL + Q +PP+ V +++ W + G P + YA F + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKV-YHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.574e-16 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 25 VEAMTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTV 420 V A + PS A RLQ+EL+ ++ G +DNL +W+ ++GA GT+Y + ++L ++FP YP AP V FL P HP++ + G+ICLDIL + WS V ++ +SI S+L + Sbjct: 13 VAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC-YHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNI 144
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.056e-16 Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 25 VEAMTSSSAPSRKALSKIAS-------NRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 V+ +SS SRK S RLQ+EL+ ++ G +DNL +WI ++GA GT+Y + ++L ++FP YP AP V F+ P HP++ S+G+ICLDIL D WS V ++ +S+ S+L Sbjct: 6 VDPAAASSVASRKGQESGTSAARGSVGKRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPC-FHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLL 139
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 25 VEAMTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTV 420 V A+ + P A RLQ+EL+ + G +DNL +W+ ++GA GT+Y + ++L ++FP YP AP V FL P HP++ + G+ICLDIL D WS V ++ +SI S+L + Sbjct: 13 VAAVRKGAEPCGGAARGPVGKRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC-YHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNI 144
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 79 ASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSS 414 +S R+ KEL + + +PP V D+L W + G + YA F L + FP YP + P++ F HP+I +NG+ICLDIL D WSPA+T+S V +SI S+L+ + Sbjct: 3 SSKRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKI-YHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDA 114 The following BLAST results are available for this feature:
BLAST of FC929193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929193 ID=FC929193; Name=FC929193; organism=Citrus clementina; type=EST; length=767bpback to top |