FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 8.072e-56
Identity = 114/237 (48.10%), Postives = 158/237 (66.67%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSG-KNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS 707
            EF  E+ +++ LQH NLVK+ G C+EG++ +LVYE++ N SL H LF     ++KL+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPKI+DFG+A++   ++T   T RV GT GYM+PEYA++G  + K+DVYSFGV+ LEI+SG KN+  Y  D +    + + + L  +G+  ELVDP  G  +   E  R I IALLC       RPTMS +V ML  S
Sbjct:  366 EFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDS-TMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTS 601          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.166e-54
Identity = 114/238 (47.90%), Postives = 159/238 (66.81%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY-VPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  E+ +++ LQH NLVK+ G C+EG++ +LVYE++ N SL + LF     Q +L+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPK++DFG+A++   ++T  +T RV GT GYMAPEYA++G  + K+DVYSFGV+ LEIVSG  N S    D + +  + + + L  +G+  ELVDP  G  +   E  R I IALLC     + RPTMS +V ML  SS
Sbjct:  384 EFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFD-PTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSS 620          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.522e-54
Identity = 114/241 (47.30%), Postives = 163/241 (67.63%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT---HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  EI +++ LQH NLV++ G C++G++ LLVYE+++N SL   +F  E  QL L+W VR K+  GIARGL +LHE+SRF+I+HRD+KA+N+LLD+++NPKI+DFGLAKL +  +T     ++R+AGT GYMAPEYA+ G  + K DV+SFGV+ +EI++GK  NN     D +    L W +   R  T++ ++DP L +  ++ E  R I I LLC   S + RPTM+ V  ML   S
Sbjct:  397 EFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQL-LDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSL-TAGSRNEILRCIHIGLLCVQESAATRPTMATVSLMLNSYS 635          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.597e-54
Identity = 109/240 (45.42%), Postives = 159/240 (66.25%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFN-KVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF+ E+++++ LQH NLV++ G C++G++ +L+YE+ +N SL H +F   N ++ L+W  R +I  G+ARGL +LHE+SRFKIVHRD+KA+NVLLD  +NPKI+DFG+AKL   D+  +T  +++VAGT GYMAPEYA+ G  + K DV+SFGV+ LEI+ GK N     + +    L + +   R G ++ +VDP L        E  + I I LLC   +   RPTM+ VV ML  +S
Sbjct:  384 EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDS-NRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNANS 622          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.597e-54
Identity = 110/241 (45.64%), Postives = 163/241 (67.63%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT---HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  EI +++ LQH NLV++ G C+EG + +LVYE+++N SL + +F  +  QL L+W VR K+  G+ARGL +LHE+SR++I+HRD+KA+N+LLD+++NPKI+DFGLAKL + ++T     ++++AGT GYMAPEYA++G  + K DV+SFGV+ +EI++GK  NN     D      L W +   R   ++ ++DP L +  ++ E  R I I LLC   SP+ RPTM  V  ML   S
Sbjct:  401 EFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQL-LDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSL-TTGSRSEILRCIHIGLLCVQESPASRPTMDSVALMLNSYS 639          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.785e-54
Identity = 113/252 (44.84%), Postives = 163/252 (64.68%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRL-------GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML-EGSSNIPDVIP 731
            EF+ E+ +I+ LQH NLV++ GCC+EGD+ +L+YEY+EN SL   LFG +  + KLNW  R  I  G+ARGL +LH++SRF+I+HRD+K +N+LLD+++ PKISDFG+A++ E ++T  +T +V GT GYM+PEYA++G  + K+DV+SFGV+ LEIVSGK N  +         L + +   + G  +E+VDP +        S F   E  + I+I LLC       RP MS VV M    ++ IP   P
Sbjct:  568 EFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFG-KTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKP 818          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.785e-54
Identity = 112/249 (44.98%), Postives = 164/249 (65.86%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGG 743
            EF  E+ +++ LQH NLVK+ G C+E ++ +LVYE++ N SL + LF     Q +L+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPK++DFG+A++ E ++T   T RV GT GYM+PEYA++G  + K+DVYSFGV+ LEI+SG+ N S Y  D++    + + + L   G+ ++LVD      + + E  R I IALLC       RPTMS +V ML  +S+I   +P+  G
Sbjct:  380 EFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSR-MQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLT-TSSIALAVPQPPG 626          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 5.785e-54
Identity = 109/237 (45.99%), Postives = 158/237 (66.67%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            +F  E+ +IS +QH NLV++ GC +EG + LLVYEY+ N SL   LF  +N+   L+W  R  I +GI+ GL +LH  S  KI+HRDIK +N+LLDR+L+PKI+DFGL +    +KT  +T +AGT+GY+APEY + G LT KADVY+FGV+ +EIV+GK N ++   ++      W     ++ TL   +DPRL   F + EA ++++I LLC  +S  LRP+MSE+V ML+   +
Sbjct:  358 QFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFM-KNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEH--FKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQNKDS 591          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.555e-54
Identity = 110/248 (44.35%), Postives = 163/248 (65.73%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSG-KNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAG 740
            EF  E+ +++ LQH NLV++ G C+EG++ +LVYE++ N SL + LF     + +L+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPK++DFG+A++   ++T  +T RV GT GYMAPEYA++G  + K+DVYSFGV+  EI+SG KN+  Y  D + +  + + + L  +G+ ++LVDP  G  +   +  R I IALLC       RP MS +V ML  SS +  V  + G
Sbjct:  548 EFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFD-TTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSSIVLAVPKQPG 794          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 7.555e-54
Identity = 109/249 (43.78%), Postives = 163/249 (65.46%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGL 746
            EF  E+ +++ LQH NLV++ G C++G++ +LVYEY+ N SL + LF       +L+W  R KI  G+ARG+ +LH++SR  I+HRD+KA+N+LLD D+NPKI+DFG+A++   ++T  +T R+ GT GYM+PEYA+ G  + K+DVYSFGV+ LEI+SGK N S+         + +A+ L  +G  +ELVDP +     + E  R + I LLC    P+ RPT+S +V ML  S+ +   +P   GL
Sbjct:  377 EFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKG-QLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLT-SNTVTLPVPRQPGL 623          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK19_ARATH8.072e-5648.10Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK20_ARATH1.166e-5447.90Putative cysteine-rich receptor-like protein kinas... [more]
CRK29_ARATH1.522e-5447.30Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK41_ARATH2.597e-5445.42Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK28_ARATH2.597e-5445.64Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
SRK6_BRAOE5.785e-5444.84Putative serine/threonine-protein kinase receptor ... [more]
CRK5_ARATH5.785e-5444.98Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK1_ARATH5.785e-5445.99Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRK23_ARATH7.555e-5444.35Putative cysteine-rich receptor-like protein kinas... [more]
CRK10_ARATH7.555e-5443.78Cysteine-rich receptor-like protein kinase 10 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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