FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.880e-50
Identity = 97/233 (41.63%), Postives = 148/233 (63.52%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ +I  ++H NLV++ G CVEG   +LVY++++N +L   + G       L W +R  I LG+A+GLA+LHE    K+VHRDIK++N+LLDR  N K+SDFGLAKL   E ++++TRV GT GY+APEYA  G L  K+D+YSFG++ +EI++G+N + Y      T  +DW   +  +    E+VDP++    +    +R++ +AL C +   + RP M  ++ MLE
Sbjct:  194 EFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.880e-50
Identity = 111/246 (45.12%), Postives = 163/246 (66.26%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEA 737
            EF  E+++++ LQH NLVK+ G C EGD+ +LVYE++ N+SL H +F  +   L L W VR +I  GIARGL +LHE+S+ KI+HRD+KA+N+LLD ++NPK++DFG A+L + ++T   T R+AGT GYMAPEY   G ++ K+DVYSFGV+ LE++SG+ N S+  +        +A+     G    ++DP L  E  + E  ++I+I LLC   + + RPTMS V+  L GS  I   +P+A
Sbjct:  388 EFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSL-LTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAA----FAWKRWVEGKPEIIIDPFL-IENPRNEIIKLIQIGLLCVQENSTKRPTMSSVIIWL-GSETIIIPLPKA 626          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 8.644e-50
Identity = 108/237 (45.57%), Postives = 149/237 (62.87%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  E+ +++ LQH NLVK+ G  ++  + LLVYE++ N SL   LF     Q +L+W  R  I +G++RGL +LHE S F I+HRD+K++NVLLD  + PKISDFG+A+  D +    ++ RV GT GYMAPEYA+ G  + K DVYSFGV+ LEI++GK N           P  +A+     GT MEL+DP L    +K E+ + ++IAL C   +P+ RPTM  VVSML   S
Sbjct:  373 EFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFD-PIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGLGEGTDLP-TFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSMLSSDS 607          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 8.644e-50
Identity = 106/243 (43.62%), Postives = 154/243 (63.37%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV 725
            EF  E+ +++ LQH NLVK+ G C+E ++ +LVYE++ N SL + LF     Q +L+W  R  I  GI RG+ +LH++SR  I+HRD+KA+N+LLD D+ PKI+DFG+A++   +++  +T R+AGT GYM PEY + G  + K+DVYSFGV+ LEI+ GK N S Y  D+     + + + L  +G+ +ELVD  +       E  R I IALLC    P  RP +S ++ ML  SS I  V
Sbjct:  407 EFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFD-PTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSV 648          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 1.129e-49
Identity = 105/244 (43.03%), Postives = 161/244 (65.98%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP--LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI-PD 722
            EF  E+ +++ L H NLVK+ G C+EG++ +LVYE++ N SL + LF     Q +L+W  R  I  GI RG+ +LH++SR  I+HRD+KA+N+LLD D+NPKI+DFG+A++   +++  +T ++AGT GYM PEY   G  + ++DVYSFGV+ LEI+ G+NN  ++  S+ T    + +A+ L R+ + +ELVDP +       E  R I IALLC   +P+ RP++S +  ML  +S + PD
Sbjct:  376 EFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFD-PTKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNN-RFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRPSLSTINMMLINNSYVLPD 617          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.474e-49
Identity = 101/235 (42.98%), Postives = 146/235 (62.13%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPD-SNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MIS   H NL+++ G C    + LLVY YM N S+A  L     ++  L+W  R+KI +G ARGL +LHE+   KI+HRD+KA N+LLD      + DFGLAKL   E +H++T V GT+G++APEY   G  + K DV+ FG++ LE+++G   + +    S     L+W   LH+   + ELVD  LG+ ++++E   M+++ALLCT   P+ RP MSEVV MLEG
Sbjct:  340 QFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRL----KAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEG 570          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.515e-49
Identity = 104/242 (42.98%), Postives = 147/242 (60.74%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGG-ENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV 725
            EF+ EI  +  L+H NLV + G C + + LLL+Y+Y+ N SL   L+     S + L+W  R KI  GIA GL +LHEE    ++HRDIK +NVL++ D+NP++ DFGLA+L E      +T V GTIGYMAPE A  G  +  +DV++FGV+ LEIVSG+       DS      DW   LH  G ++  VDPRLG  ++ VEA   + + LLC +  P+ RP+M  V+  L G  ++P++
Sbjct:  403 EFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRR----PTDSGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPEI 640          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.290e-49
Identity = 105/242 (43.39%), Postives = 162/242 (66.94%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML--EGSSNIP 719
            EF  E+ +++ LQH NLVK+ G C EG++ +LVYE++ N+SL H +F  E+ +  L W VR +I  G+ARGL +LHE+S+ +I+HRD+KA+N+LLD ++NPK++DFG+A+L   ++T   T RV GT GYMAPEY   G  + K+DVYSFGV+ LE++SG+ N ++  +        +A+     G L  ++DP L +E  + E  ++I+I LLC   + + RPTM+ V++ L  +G+  IP
Sbjct:  380 EFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFD-EDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNFETEGLPA----FAWKRWIEGELESIIDPYL-NENPRNEIIKLIQIGLLCVQENAAKRPTMNSVITWLARDGTFTIP 615          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.290e-49
Identity = 101/238 (42.44%), Postives = 154/238 (64.71%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY-VPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  E ++++ LQH NLV + G C+EG++ +LVYE++ N SL   LF     + +L+W  R KI +G ARG+ +LH +S  KI+HRD+KA+N+LLD ++ PK++DFG+A++   +++   T RV GT GY++PEY + G  + K+DVYSFGV+ LEI+SGK N ++   D +    + +A+   R+G+ +ELVD  L   +   E  R I IALLC    P  RP +S ++ ML  +S
Sbjct:  361 EFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFE-PTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNS 597          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.603e-49
Identity = 103/238 (43.28%), Postives = 150/238 (63.03%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP-DSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  E+ +++ LQH NLV++ G C+E D+ +LVYE++ N SL + LF  +    +L+W  R  I  G+ RGL +LH++SR  I+HRDIKA+N+LLD D+NPKI+DFG+A+    ++T   T RV GT GYM PEY   G  + K+DVYSFGV+ LEIV GK N S+   D +    +   + L  + + ++L+DP +   ++  E  R I I +LC   +P+ RP MS +  ML  SS
Sbjct:  379 EFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKS-QLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQETPADRPEMSTIFQMLTNSS 615          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1154_ARATH3.880e-5041.63Probable serine/threonine-protein kinase At1g01540... [more]
CRK40_ARATH3.880e-5045.12Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK27_ARATH8.644e-5045.57Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK12_ARATH8.644e-5043.62Putative cysteine-rich receptor-like protein kinas... [more]
CRK14_ARATH1.129e-4943.03Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
Y2239_ARATH1.474e-4942.98Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH2.515e-4942.98Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK36_ARATH4.290e-4943.39Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK33_ARATH4.290e-4942.44Putative cysteine-rich receptor-like protein kinas... [more]
CRK31_ARATH5.603e-4943.28Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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