FC929266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: ROCO5_DICDI (Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum GN=roco5 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEEEKTHISTRVAGTIG-----YMAPEYALWGYLTYKADVYSFGVVALEIVSG 479 EF E+ + + L HP++V + G C+ D +V EY+ N +L L S + W ++ KI + IA + +H + KI HRD+K+ N+L+ D+N K+SDFG E + T G +++PE T KADVYSFG+V EI++G Sbjct: 2220 EFRREVWLSNTLTHPSIVSLKGYCL--DPCCIVMEYIPNGTLYSHL---RKSFSSITWQLKLKIAINIADAIKHMHGFTP-KICHRDLKSPNILMLSDMNAAVVCKVSDFG-------ETRAVVTSALGRDKLSNPIWLSPEIMRGDEYTEKADVYSFGIVLWEILTG 2374
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK3_PANTR (NT-3 growth factor receptor OS=Pan troglodytes GN=NTRK3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470 +F E +++ LQH ++VK +G C +GD L++V+EYM++ L A L G+ Q K + Q + + IA G+ +L + VHRD+ N L+ +L KI DFG+++ + + + I +M PE ++ T ++DV+SFGV+ EI Sbjct: 584 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 749
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK3_MOUSE (NT-3 growth factor receptor OS=Mus musculus GN=Ntrk3 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470 +F E +++ LQH ++VK +G C +GD L++V+EYM++ L A L G+ Q K + Q + + IA G+ +L + VHRD+ N L+ +L KI DFG+++ + + + I +M PE ++ T ++DV+SFGV+ EI Sbjct: 584 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 749
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK3_MACFA (NT-3 growth factor receptor OS=Macaca fascicularis GN=NTRK3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470 +F E +++ LQH ++VK +G C +GD L++V+EYM++ L A L G+ Q K + Q + + IA G+ +L + VHRD+ N L+ +L KI DFG+++ + + + I +M PE ++ T ++DV+SFGV+ EI Sbjct: 584 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 749
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NTRK3_CHICK (NT-3 growth factor receptor OS=Gallus gallus GN=NTRK3 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 470 +F E +++ LQH ++VK +G C +GD L++V+EYM++ L A L G+ Q K + Q + + IA G+ +L + VHRD+ N L+ +L KI DFG+++ + + + I +M PE ++ T ++DV+SFGV+ EI Sbjct: 586 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 751
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA4_MOUSE (Ephrin type-A receptor 4 OS=Mus musculus GN=Epha4 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476 +FL E +++ HPN++ + G + ++++ EYMEN SL L G + ++L +R GI G+ +L + S VHRD+ A N+L++ +L K+SDFG++++ E++ T G I + APE + T +DV+S+G+V E++S Sbjct: 666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA4_HUMAN (Ephrin type-A receptor 4 OS=Homo sapiens GN=EPHA4 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476 +FL E +++ HPN++ + G + ++++ EYMEN SL L G + ++L +R GI G+ +L + S VHRD+ A N+L++ +L K+SDFG++++ E++ T G I + APE + T +DV+S+G+V E++S Sbjct: 666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPHA4_CHICK (Ephrin type-A receptor 4 OS=Gallus gallus GN=EPHA4 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476 +FL E +++ HPN++ + G + ++++ EYMEN SL L G + ++L +R GI G+ +L + S VHRD+ A N+L++ +L K+SDFG++++ E++ T G I + APE + T +DV+S+G+V E++S Sbjct: 666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EPA4B_XENLA (Ephrin type-A receptor 4-B OS=Xenopus laevis GN=epha4-B PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 476 +FL E +++ HPN++ + G + ++++ EYMEN SL L G + ++L +R GI G+ +L + S VHRD+ A N+L++ +L K+SDFG++++ E++ T G I + APE + T +DV+S+G+V E++S Sbjct: 665 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 818
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: DDR1_PANTR (Epithelial discoidin domain-containing receptor 1 OS=Pan troglodytes GN=DDR1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 53/173 (30.64%), Postives = 91/173 (52.60%), Query Frame = 3 Query: 3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL-----AHAL---------FGGENSQ-LKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIV 473 +FL E+ ++S L+ PN++++ G CV+ D L ++ +YMEN L AH L G+ +Q +++P+ + IA G+ +L + VHRD+ N L+ + KI+DFG+++ L + + R I +MA E L G T +DV++FGV E++ Sbjct: 664 DFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYL---ATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVL 833 The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bpback to top |