FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.318e-49
Identity = 100/237 (42.19%), Postives = 145/237 (61.18%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            EF  E+  I  ++H NLV++ G C+EG   +LVYEY+ + +L   L G       L W  R KI  G A+ LA+LHE    K+VHRDIKA+N+L+D + N K+SDFGLAKL +  ++HI+TRV GT GY+APEYA  G L  K+D+YSFGV+ LE ++G++ + Y   +N    ++W   +  +    E+VDPRL    +K   +R + ++L C +     RP MS+V  MLE   +
Sbjct:  223 EFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESDEH 459          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.318e-49
Identity = 107/245 (43.67%), Postives = 151/245 (61.63%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQL-------KLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF  E+ +++ LQH NLV++ G C+E D+ +LVYE++ N SL + LFG +   L       +L+W  R  I  GI RGL +LH++SR  I+HRDIKA+N+LLD D+NPKI+DFG+A+    ++T  +T RV GT GYM PEY   G  + K+DVYSFGV+ LEIV GK N S Y  D +    +   + L  + + ++L+DP +    +  +  R I I LLC   +P  RP MS +  ML  SS
Sbjct:  361 EFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGLLCVQETPVDRPEMSTIFQMLTNSS 605          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.557e-49
Identity = 104/235 (44.26%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            F  E+ MIS   H NL+++ G C    + LLVY +M+N SLAH L   +     L+W  R++I LG ARG  +LHE    KI+HRD+KA NVLLD D    + DFGLAKL +  +T+++T+V GT+G++APEY   G  + + DV+ +G++ LE+V+G+   + S + + +    LD    L R   L  +VD  L  E+ K E E MI++ALLCT  SP  RP MSEVV MLEG
Sbjct:  332 FQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEG 566          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.248e-48
Identity = 109/250 (43.60%), Postives = 155/250 (62.00%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR-VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 749
            EF  E+ +++ LQH NLVK+ G C EGD+ +LVYE++ N+SL H +F  E  +L L W +R +I  G+ARGL +LHE+S+ +I+HRD+KA+N+LLD  +NPK++DFG+A+L   ++T   TR V GT GYMAPEY      + K DVYSFGVV LE+++G++N +Y           +A+    +G    ++D  L S     E  R I I LLC   + S RPTMS V+  L GS  I   +P   G +
Sbjct:  379 EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFD-EEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYFEALGLPA---YAWKCWVAGEAASIIDHVL-SRSRSNEIMRFIHIGLLCVQENVSKRPTMSLVIQWL-GSETIAIPLPTVAGFT 622          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.129e-48
Identity = 107/249 (42.97%), Postives = 159/249 (63.86%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHR--SGTLMELVDPRLGSEFNKV---EAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIP 731
            EF  E+ +++ LQH NLVK+ G C E D+ +LVYE++ N+SL H +F  E  ++ L W VR  I  G+ARGL +LHE+S+ +I+HRD+KA+N+LLD ++NPK++DFG+A+L D +E    ++RV GT GYMAPEYA +G  + K+DVYSFGV+ LE++SGK+N     +         AF   R   G   E++DP L +  N +   E  ++I I LLC     S RP+++ ++  LE  + I   +P
Sbjct:  385 EFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRV-LTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDP-LAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILFWLERHATITMPVP 631          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.781e-48
Identity = 101/238 (42.44%), Postives = 150/238 (63.03%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT--HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRL--GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            EF  E  +++ LQH NLVK+ G  +EG + LLVYE++ + SL   +F       +L W +R KI  G+ARGL +LH++SR +I+HRD+KA+N+LLD ++ PKI+DFG+A+L + + T    + R+ GT GYMAPEY + G  ++K DVYSFGV+ LEI+SGK N  +  + +    + +A+   + G  + LVD  L   S ++     R I I LLC     + RP+M+ VV ML+G
Sbjct:  384 EFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGN-ELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDG 620          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.632e-48
Identity = 106/237 (44.73%), Postives = 144/237 (60.76%), Query Frame = 3
Query:   15 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIS------TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS 707
            EI +IS  QH NLV++ GCC       +VYE++ N SL H LF  E  + +L+W  R+ I LG A GL +LHE    KI+HRDIKA+N+LLD    PKISDFGLAK   E    I       + +AGT+GYMAPEY   G L+ K D YSFGV+ LEI SG  N  +  D++    +   +    S  + E++D  +G + +K E +R+++I LLCT  SP LRPTMS+V+ M+  +
Sbjct:  375 EIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEKKK-ELDWKKRRTIILGTAEGLEYLHETC--KIIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSST 608          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.743e-48
Identity = 100/236 (42.37%), Postives = 146/236 (61.86%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MIS   H NL+++ G C+   + LLVY YM N S+A  L         L+WP R+ I LG ARGLA+LH+    KI+HRD+KA N+LLD +    + DFGLAKL     +H++T V GTIG++APEY   G  + K DV+ +GV+ LE+++G+   +++ + + +    LDW   + +   L  LVD  L  ++ + E E++I++ALLCT +S   RP MSEVV MLEG
Sbjct:  335 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEG 570          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48
Identity = 99/234 (42.31%), Postives = 142/234 (60.68%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRS-GTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF+ E+  +S   HPNLVK+ G C EGDQ LLVYEYM   SL   L    + +  L+W  R KI  G ARGL +LH+     +++RD+K +N+LL  D  PK+SDFGLAK+    +KTH+STRV GT GY AP+YA+ G LT+K+D+YSFGVV LE+++G+  +           + WA  L +      ++VDP L  ++      + + I+ +C    P++RP +S+VV  L
Sbjct:  144 EFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48
Identity = 106/235 (45.11%), Postives = 142/235 (60.43%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +  L HPNLV + G C EG+  LLVYE+M   SL + LF        L W +R K+ +G A+GL FLHE ++ ++++RD KA N+LLD D N K+SDFGLAK     + TH+ST+V GT GY APEY   G LT K+DVYSFGVV LE++SG+  M      N    +DWA  +L     L  ++D +LG ++ +  A     +AL C N    LRP MSEV+  LE
Sbjct:  136 EWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLF--RRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLE 367          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2296_ARATH7.318e-4942.19Probable receptor-like protein kinase At2g42960 OS... [more]
CRK32_ARATH7.318e-4943.67Putative cysteine-rich receptor-like protein kinas... [more]
Y5129_ARATH9.557e-4944.26Probable LRR receptor-like serine/threonine-protei... [more]
CRK38_ARATH1.248e-4843.60Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK37_ARATH2.129e-4842.97Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK26_ARATH2.781e-4842.44Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK43_ARATH3.632e-4844.73Putative cysteine-rich receptor-like protein kinas... [more]
SERK4_ARATH4.743e-4842.37Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RLCK7_ARATH6.195e-4842.31Probable serine/threonine-protein kinase RLCKVII O... [more]
APK2A_ARATH6.195e-4845.11Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
back to top