FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.091e-48
Identity = 105/235 (44.68%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +  L HPNLVK+ G CVEG+  LLVYE+M   SL + LF        L W +R K+ +G A+GL FLH+ ++ ++++RD KA N+LLD + N K+SDFGLAK     +KTH+ST+V GT GY APEY   G LT K+DVYSFGVV LE++SG+  +           +DWA  +L     L  ++D RLG ++ +  A     +AL C N    LRP MSEV++ L+
Sbjct:  133 EWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLF--RRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLD 364          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.057e-47
Identity = 104/255 (40.78%), Postives = 159/255 (62.35%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR-VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP---LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS------NIPDVIPEA 737
            +F  E  ++S +QH NL ++ G C++GD   L+YE++ N SL + LF  E  Q +L+W  R KI  GIA+G+  LH++ +  I++RD KA+N+LLD D+NPKISDFG+A +   E++  +T  +A T  YM+PEYA+ G  + K+DVYSFG++ LEI+SGK N S   +   T     + +A+ L R+G+ ++L+D  +G  +   E  R I IALLC   +P  RP +S +VSML  ++       IP   P++
Sbjct:  393 KFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEK-QGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEIISGKKNSSLYQNDETTTAGNLVTYAWRLWRNGSQLKLLDSSIGRNYQSNEVTRCIHIALLCVQENPEDRPKLSTIVSMLTSNTISVPAPGIPGFFPQS 646          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47
Identity = 101/247 (40.89%), Postives = 147/247 (59.51%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAG 740
            EF+ EI  +  L+H NLV + G C   + LLL+Y+Y+ N SL   L+     S   L+W  R +I  GIA GL +LHEE    ++HRD+K +NVL+D  +NP++ DFGLA+L E      +T + GTIGYMAPE +  G  +  +DV++FGV+ LEIV G+       DS     +DW   LH +G ++  +DPRLGS ++  EA   + + LLC +  P+ RP+M  V+  L G  N+P++  E G
Sbjct:  407 EFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRK----PTDSGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDEWG 649          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.802e-47
Identity = 106/235 (45.11%), Postives = 149/235 (63.40%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            E+L EI  +  L HPNLVK+ G C+E +Q LLVYE+M   SL + LF   N   K L+W +R K+ L  A+GLAFLH +   K+++RDIKA+N+LLD D N K+SDFGLA+     E++++STRV GT GY APEY   G+L  ++DVYSFGVV LE++ G+  + +   +     +DWA  +L     ++ +VD RL S++    A R+  IA+ C +  P  RPTM +VV  L
Sbjct:  111 EWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDP-VKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL 344          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 101/242 (41.74%), Postives = 143/242 (59.09%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGG-ENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV 725
            EF+ EI  +  L+H NLV + G C   + LLL+Y+Y+ N SL   L+     S   L+W  R +I  GIA GL +LHEE    ++HRD+K +NVL+D D+NP++ DFGLA+L E      +T V GTIGYMAPE A  G  +  +DV++FGV+ LEIVSG+       DS      DW   L  SG ++  +DPRLGS +++ EA   + + LLC +  P  RP M  V+  L    ++P++
Sbjct:  404 EFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRK----PTDSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPEI 641          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.074e-47
Identity = 99/236 (41.95%), Postives = 145/236 (61.44%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MIS   H NL+++ G C+   + LLVY YM N S+A  L         L+WP R+ I LG ARGLA+LH+    KI+H D+KA N+LLD +    + DFGLAKL     +H++T V GTIG++APEY   G  + K DV+ +GV+ LE+++G+   +++ + + +    LDW   + +   L  LVD  L  ++ + E E++I++ALLCT +S   RP MSEVV MLEG
Sbjct:  316 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEG 551          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.074e-47
Identity = 102/239 (42.68%), Postives = 150/239 (62.76%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            EF  E+ +++ LQH NLV++ G  V+G++ ++VYEY+ N SL + LF     Q +L+W  R KI  G ARG+ +LH++S+  I+HRD+KA N+LLD  +NPK++DFG A++   ++   I+   AGT GYMAPEY   G  + K+DVYS+GV+ LEI+ GK N S+   S     + + + L +SGT + LVD  +   +   E  R I IALLC    P+ RP  S ++SML  +S I
Sbjct:  398 EFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFD-PTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSF--SSPVQNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLI 633          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.015e-47
Identity = 102/239 (42.68%), Postives = 145/239 (60.67%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRS-GTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            EFL E+ M+S L HPNLV + G C +GDQ LLVYE+M   SL   L      +  L+W +R KI  G A+GL FLH+++   +++RD K++N+LLD   +PK+SDFGLAKL    +K+H+STRV GT GY APEYA+ G LT K+DVYSFGVV LE+++G+  +           + WA  L       ++L DPRL   F      + + +A +C     + RP +++VV+ L   +N
Sbjct:  127 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLAN 365          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 185.652 bits (470), Expect = 2.603e-46
Identity = 95/233 (40.77%), Postives = 135/233 (57.94%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+  +S  QHPNLV + G C   +  LL+Y YMEN SL + L    +    L W  R +I  G A+GL +LHE     I+HRDIK++N+LLD + N  ++DFGLA+L    +TH+ST + GT+GY+ PEY      TYK DVYSFGVV LE+++ K  +       C   + W   +       E+ DP + S+ N  E  R+++IA LC + +P  RPT  ++VS L+
Sbjct:  774 EFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLD 1006          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 9.890e-46
Identity = 107/260 (41.15%), Postives = 155/260 (59.62%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-LHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLR 776
            E+L E+  +    HPNLVK+ G C+E +  LLVYE+M   SL + LF   +    L+W +R K+ LG A+GLAFLH  +   +++RD K +N+LLD + N K+SDFGLAK     +K+H+STR+ GT GY APEY   G+LT K+DVYS+GVV LE++SG+  +           ++WA   L     L  ++D RL  +++  EA ++  +AL C      LRP M+EVVS LE        + EAGG + D+  + +R
Sbjct:  119 EWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHI----QTLNEAGGRNIDMVQRRMR 373          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APK2B_ARATH8.091e-4844.68Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
CRK22_ARATH1.057e-4740.78Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
LRKA1_ARATH1.380e-4740.89Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y3545_ARATH1.802e-4745.11Probable receptor-like protein kinase At3g55450 OS... [more]
LRKA3_ARATH2.354e-4741.74Lectin-domain containing receptor kinase A4.3 OS=A... [more]
SERK5_ARATH3.074e-4741.95Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
CRK13_ARATH3.074e-4742.68Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
PBS1_ARATH4.015e-4742.68Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PSKR1_ARATH2.603e-4640.77Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
APK1B_ARATH9.890e-4641.15Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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