FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.687e-45
Identity = 103/236 (43.64%), Postives = 141/236 (59.75%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPD---SNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF+ E+  +  ++HPNLV + G C   ++ LLVYEYM N SL H L         L+W  R KI +G ARGLAFLH      I+HRDIKA+N+LLD D  PK++DFGLA+L    ++H+ST +AGT GY+ PEY      T K DVYSFGV+ LE+V+GK      PD   S     + WA      G  ++++DP L S   K    R+++IA+LC   +P+ RP M +V+  L+
Sbjct:  957 EFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG--PDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.411e-45
Identity = 95/235 (40.43%), Postives = 138/235 (58.72%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDS-NCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MI    H NL+++ G C+  ++ +LVY YM N S+A  L      +  L+W  R  I LG ARGL +LHE+   KI+HRD+KA N+LLD      + DFGLAKL ++  +H++T V GTIG++APEY   G  + K DV+ FGV+ LE+++G   +            L W   L       E+VD  L  EF+ +  E ++++ALLCT   P+LRP MS+V+ +LEG
Sbjct:  340 QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEG 574          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 8.372e-45
Identity = 101/235 (42.98%), Postives = 147/235 (62.55%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L EI  +  L HPNLVK+ G C+E +  LLVYE+M   SL + LF        L+W  R ++ LG ARGLAFLH  ++ ++++RD KA+N+LLD + N K+SDFGLA+     + +H+STRV GT GY APEY   G+L+ K+DVYSFGVV LE++SG+  +           +DWA  +L     L+ ++DPRL  +++   A ++  +AL C +     RPTM+E+V  +E
Sbjct:  118 EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME 351          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.372e-45
Identity = 103/235 (43.83%), Postives = 147/235 (62.55%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L EI  +  L HPNLVK+ G C+E +  LLVYE+M+  SL + LF        L W +R  + L  A+GLAFLH +   K+++RDIKA+N+LLD D N K+SDFGLA+     + +++STRV GT GY APEY   G+L  ++DVYSFGV+ LEI+SGK  + +   +     +DWA  +L     ++ +VD RL +++   EA RM  +A+ C +  P  RPTM +VV  L+
Sbjct:  117 EWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDP-VKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQ 350          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.182e-44
Identity = 102/235 (43.40%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +    H +LVK+ G C+E +  LLVYE+M   SL + LF        L+W +R K+ LG A+GLAFLH  S  ++++RD K +N+LLD + N K+SDFGLAK     +K+H+STRV GT GY APEY   G+LT K+DVYSFGVV LE++SG+  +     S     ++WA  +L     +  ++D RL  +++  EA ++  ++L C      LRP MSEVVS LE
Sbjct:  118 EWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.427e-44
Identity = 96/232 (41.38%), Postives = 131/232 (56.47%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            FL  ++ +S L+HPN+V + G C E  Q LLVYEY+ N +L   L   ++  + L W  R K+ LG A+ L +LHE     IVHR+ K+ N+LLD +LNP +SD GLA L    +  +ST+V G+ GY APE+AL G  T K+DVY+FGVV LE+++G+  +           + WA   LH    L ++VDP L   +      R   I  LC    P  RP MSEVV  L
Sbjct:  438 FLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQL 669          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.000e-43
Identity = 92/233 (39.48%), Postives = 144/233 (61.80%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            F+ E+ ++S ++H NLV   G C E  + +LVYEY+   SLA  L+G  + +  LNW  R K+ +  A+GL +LH  S  +I+HRD+K++N+LLD+D+N K+SDFGL+K   + + +HI+T V GT GY+ PEY     LT K+DVYSFGVV LE++ G+  +S+    +    + WA    ++G   E+VD  L   F+    ++   IA+ C     S RP+++EV++ L+
Sbjct:  647 FINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGA-FEIVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLK 878          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.280e-42
Identity = 103/250 (41.20%), Postives = 151/250 (60.40%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM---SYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEA-ERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEA 737
            EF  EI ++S + H N+VK+ G C +  + +LVYEY+ N SL   L G   + +KL+W  R KI LG  +GLA+LHE +   I+HRD+K+ N+LLD  L  K++DFGL+KL  + EK H++T+V GT+GY+ PEY +   LT K+DVY FGVV LE+++GK+ +   SYV        +D + +L+    L EL+D  +      ++  E+ + +AL C       RPTMSEVV  LE    +  + P A
Sbjct:  674 EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSG--KNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVV-KEVKKKMDKSRNLY---DLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESILRLVGLNPNA 917          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.280e-42
Identity = 94/241 (39.00%), Postives = 142/241 (58.92%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS---YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            +F+ E+A++S + H NLV + G C E D+ +LVYEYM N SL   L G  + +  L+W  R +I    A+GL +LH      I+HRD+K++N+LLD ++  K+SDFGL++  EE+ TH+S+   GT+GY+ PEY     LT K+DVYSFGVV  E++SGK  +S   + P+ N    + WA  L R G +  ++DP + S        R+ ++A  C       RP M EV+  ++ +  I
Sbjct:  646 QFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK-PLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNI---VHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRI 882          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.889e-42
Identity = 89/233 (38.20%), Postives = 132/233 (56.65%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+  +S  +H NLV + G C  G+  LL+Y +MEN SL + L    +  + L W VR KI  G ARGLA+LH+     ++HRD+K++N+LLD      ++DFGLA+L     TH++T + GT+GY+ PEY+     T + DVYSFGVV LE+V+G+  +      +C   +   F +       EL+D  +    N+     M++IA  C +  P  RP + EVV+ LE
Sbjct:  794 EFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLE 1026          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EXS_ARATH1.687e-4543.64Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5457_ARATH6.411e-4540.43Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH8.372e-4542.98Probable serine/threonine-protein kinase NAK OS=Ar... [more]
BIK1_ARATH8.372e-4543.83Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK1A_ARATH3.182e-4443.40Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
SRF8_ARATH5.427e-4441.38Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y5487_ARATH6.000e-4339.48Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH2.280e-4241.20Probable leucine-rich repeat receptor-like protein... [more]
Y1677_ARATH2.280e-4239.00Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH3.889e-4238.20Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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