FC929266

Overview
NameFC929266
Unique NameFC929266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.889e-42
Identity = 92/234 (39.32%), Postives = 141/234 (60.26%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++S +QH NLV + G C E DQ +LVY +M N SL   L+G  + +  L+WP R  I LG ARGLA+LH      ++HRD+K++N+LLD+ +  K++DFG +K   +E  +++S  V GT GY+ PEY     L+ K+DV+SFGVV LEIVSG+  ++          ++WA    R+  + E+VDP +   ++     R++++AL C     + RP M ++V  LE
Sbjct:  636 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 869          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.664e-42
Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGEN-SQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN-NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ M+S L+H +LV + G C E ++++LVYEYM + +L   LF  +  S   L+W  R +IC+G ARGL +LH  +++ I+HRDIK TN+LLD +   K+SDFGL+++      +TH+ST V GT GY+ PEY     LT K+DVYSFGVV LE++  +   M  VP       + W    +R GT+ +++D  L ++      E+  +IA+ C       RP M++VV  LE
Sbjct:  559 EFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADL-IRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALE 794          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 8.664e-42
Identity = 94/239 (39.33%), Postives = 137/239 (57.32%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIP 719
            EF+ EI ++S + H N+VK+ GCC+E +  +LVYEY+ N  L   L   E     + W VR +I + IA  L+++H  + F I HRDIK TN+LLD     KISDFG ++    ++TH++T VAGT GYM PEY L    T+K+DVYSFGVV +E+++G+  MS V          +     +    ++++D R+  E  +V A  + K+A  C N   + RP M EV   LE   + P
Sbjct:  468 EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHD-EYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDESKQVMA--VAKLARRCLNRKGNKRPNMREVSIKLERIRSSP 703          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.664e-42
Identity = 96/263 (36.50%), Postives = 142/263 (53.99%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLREHPRE 791
            EF+ EI ++S + H N+VK+ GCC+E +  +LVYEY+ N  L   L   E+    + W VR +I + IA  L ++H  + F I HRDIK TN+LLD     K+SDFG ++    ++TH++T VAGT GYM PEY L    T+K+DVYSFGVV +E+++G+  +S V                +   +++++D R+  E    +   + K+A  C N     RP M EV + LE   + P          EDL  +T  E   E
Sbjct:  469 EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHD-ESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRSSP----------EDLDVRTENEDEEE 720          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.132e-41
Identity = 92/234 (39.32%), Postives = 139/234 (59.40%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ ++S +QH NLV + G C E DQ +LVY +M N SL   L+G    +  L+WP R  I LG ARGLA+LH      ++HRD+K++N+LLD  +  K++DFG +K   +E  +++S  V GT GY+ PEY     L+ K+DV+SFGVV LEIVSG+  ++          ++WA    R+  + E+VDP +   ++     R++++AL C     + RP M ++V  LE
Sbjct:  635 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 868          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.292e-41
Identity = 98/239 (41.00%), Postives = 144/239 (60.25%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGT---LMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+A +S ++H N+VK+       D  LLVYEYM N SL   L      Q ++ W VRQ + LG A+GL +LH      ++HRD+K++N+LLD +  P+I+DFGLAK+   D  ++   +  V GT+GY+APEYA    +  K+DVYSFGVV +E+V+GK  +      N    + W + + +      +M+L+D  +  E+ K +A +++ IALLCT+ SP  RP M  VVSMLE
Sbjct:  729 EFEAEVATLSNIKHINVVKLFCSITCEDSKLLVYEYMPNGSLWEQLHERRGEQ-EIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVM-WVWSVSKETNREMMMKLIDTSIEDEY-KEDALKVLTIALLCTDKSPQARPFMKSVVSMLE 964          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.300e-41
Identity = 99/245 (40.41%), Postives = 142/245 (57.96%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIP 731
            E+  E+  +  L H NLVK+ G C E  +LLLVYE+M   SL   LF   +      W +R KI +G ARGLAFLH   R ++++RD KA+N+LLD + + K+SDFGLAKL   +EK+H++TR+ GT GY APEY   G+L  K+DV++FGVV LEI++G    +          +DW    L     + +++D  +  ++    A  M +I L C    P  RP M EVV +LE    + +V+P
Sbjct:  136 EWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDP---FPWDLRIKIVIGAARGLAFLHSLQR-EVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGL-NVVP 375          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.616e-41
Identity = 96/255 (37.65%), Postives = 146/255 (57.25%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK----LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSED 755
            EF  EI M+S L+H +LV + G C E  +++LVYEYM N  L   L+G + +       L+W  R +IC+G ARGL +LH  +   I+HRD+K TN+LLD +L  K+SDFGL+K    ++ H+ST V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  ++           ++A +LHR G L +++DP++    +K    + ++ A  C       RP M +V+  LE +  + +   +   LSED
Sbjct:  565 EFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEASAQV-DLSED 818          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.616e-41
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 3
Query:    3 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-----GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI-STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAG 740
            EFL +++M+S L+H N V++ G CV+G+  +L YE+  N SL   L G     G      L+W  R KI +G ARGL +LHE++   I+HRDIK++NVLL  D   KI+DF L+    +    + STRV GT GY APEYA+ G L  K+DVYSFGVV LE+++G+  + +         + WA        + + VD RLG ++      ++  +A LC       RP MS VV  L+   N   V P  G
Sbjct:  112 EFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARAVAPGEG 363          
BLAST of FC929266 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.616e-41
Identity = 100/237 (42.19%), Postives = 145/237 (61.18%), Query Frame = 3
Query:    6 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKI---ALLCTNASPSLRPTMSEVVSMLE 701
            F  E+  +  ++H N+V+  GCC   +  LL+Y+YM N SL   L     S L  +W +R +I LG A+GLA+LH +    IVHRDIKA N+L+  D  P I+DFGLAKL DE +    S  VAG+ GY+APEY     +T K+DVYS+GVV LE+++GK  +   VP+      +DW   + ++   +E++D  L S   + EA+ M+++   ALLC N+SP  RPTM +V +ML+
Sbjct:  836 FSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSL--DWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEG--IHLVDW---VRQNRGSLEVLDSTLRSR-TEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK 1064          
The following BLAST results are available for this feature:
BLAST of FC929266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NORK_MEDTR3.889e-4239.32Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y5900_ARATH8.664e-4240.51Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLC_ARATH8.664e-4239.33Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
WAKLA_ARATH8.664e-4236.50Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
NORK_PEA1.132e-4139.32Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
IKU2_ARATH3.292e-4141.00Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
CX32_ARATH4.300e-4140.41Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5613_ARATH5.616e-4137.65Probable receptor-like protein kinase At5g61350 OS... [more]
Y2706_ARATH5.616e-4139.29Probable receptor-like protein kinase At2g47060 OS... [more]
RCH2_ARATH5.616e-4142.19Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AF05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929266 ID=FC929266; Name=FC929266; organism=Citrus clementina; type=EST; length=793bp
GTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAGACTTGAGGTTTAAAACTCTAAGAGAACATCCAAGAGAAAT
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