FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ACTPJ (Asparaginyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=asnS PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.837e-60 Identity = 114/192 (59.38%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DDM+F AK+ DK I RL ++PF ++ YT K GK FE V WGIDL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLR++GTV HSGFGLGFER+I++ TG+ NIR+VIPFPR P A+ Sbjct: 278 VLEERKDDMQFFAKHIDKDVITRLENFIASPFAQVDYTDAIEILL---KSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRMVEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SYNP2 (Asparaginyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=asnS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.285e-59 Identity = 116/193 (60.10%), Postives = 137/193 (70.98%), Query Frame = 3 Query: 6 WLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 ++L+ C +DMEF K D S + + + F RITYT K K FE VEWGIDL SEHERYL E F+KP+IV NYPK IKAFYMRLNDD KTVAAMDVL PK+GE+IGGSQREER DV++ RI++M + WYLDLRRFGTV H+GFGLGFER++ F TG+ NIRDVIPFPR P A+ Sbjct: 270 YVLEACPEDMEFFNKRIDNSVLATAQNIIENEFARITYTEAIALLE---KSNKTFEFPVEWGIDLQSEHERYLAEDLFKKPLIVSNYPKDIKAFYMRLNDDQKTVAAMDVLAPKIGEIIGGSQREERLDVLERRIQEMNIEAADLWWYLDLRRFGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRTPLNAE 459
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ACTP7 (Asparaginyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=asnS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.285e-59 Identity = 114/192 (59.38%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DDM+F AK+ DK I RL + PF ++ YT K GK FE V WGIDL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLR++GTV HSGFGLGFER+I++ TG+ NIR+VIPFPR P A+ Sbjct: 278 VLEERKDDMQFFAKHIDKDVITRLENFIAAPFAQVDYTDAIEILL---KSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRMVEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ACTP2 (Asparaginyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=asnS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.285e-59 Identity = 114/192 (59.38%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DDM+F AK+ DK I RL + PF ++ YT K GK FE V WGIDL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLR++GTV HSGFGLGFER+I++ TG+ NIR+VIPFPR P A+ Sbjct: 278 VLEERKDDMQFFAKHIDKDVITRLENFIAAPFAQVDYTDAIEILL---KSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRMVEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SALTY (Asparaginyl-tRNA synthetase OS=Salmonella typhimurium GN=asnS PE=3 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59 Identity = 114/191 (59.69%), Postives = 136/191 (71.20%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK I RL ST F ++ YT GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERC---GKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SALTI (Asparaginyl-tRNA synthetase OS=Salmonella typhi GN=asnS PE=3 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59 Identity = 114/191 (59.69%), Postives = 136/191 (71.20%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK I RL ST F ++ YT GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERC---GKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SALPA (Asparaginyl-tRNA synthetase OS=Salmonella paratyphi A GN=asnS PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59 Identity = 114/191 (59.69%), Postives = 136/191 (71.20%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK I RL ST F ++ YT GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERC---GKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SALCH (Asparaginyl-tRNA synthetase OS=Salmonella choleraesuis GN=asnS PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59 Identity = 114/191 (59.69%), Postives = 136/191 (71.20%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK I RL ST F ++ YT GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTEAVAILERC---GKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_KLEP7 (Asparaginyl-tRNA synthetase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=asnS PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59 Identity = 112/191 (58.64%), Postives = 137/191 (71.73%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK I+RL+ + F ++ YT GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMQFFAERVDKDAIDRLQRFITADFAQVDYTDAVTILENC---GKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_SODGM (Asparaginyl-tRNA synthetase OS=Sodalis glossinidius (strain morsitans) GN=asnS PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.738e-59 Identity = 112/186 (60.22%), Postives = 134/186 (72.04%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DDM+F A+ DK INRL+ S F ++ YT G+ FEN V WGIDL+SEHERYL E F+ PV+V NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGGSQREER D + R+ +MGL + Y WY DLRR+GTV HSGFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 283 DDMQFFAERIDKEAINRLKQFISADFAQVDYTKAVEILQNC---GQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLDRLDQRLAEMGLNKDDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGMQNIRDVIPFPRSPRNAN 465 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |