FC929270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_HAEPS (Asparaginyl-tRNA synthetase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 112/192 (58.33%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 +L+ DD++F K+ D + I+RL ++ F +I YT K GK+FE VEWGIDL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I++ TG+ NIR+VIPFPR P A+ Sbjct: 278 VLEERKDDLKFFEKHIDNTVISRLENFINSDFAQIDYTDAIEVLL---KSGKNFEFPVEWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMVEMGLNPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_HAEIN (Asparaginyl-tRNA synthetase OS=Haemophilus influenzae GN=asnS PE=3 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/186 (59.14%), Postives = 135/186 (72.58%), Query Frame = 3 Query: 27 DDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 584 DD++F K+ DK I RL ++ F +I YT K GK FE V WGIDL+SEHER+L E F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER +V+ R+E+MGL + Y WY DLR++G+V HSGFGLGFER+I++ TG+ NIRDVIPFPR P A+ Sbjct: 284 DDLQFFEKHVDKDVITRLENFVNSDFAQIDYTDAIDVLL---KSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDEKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPRNAN 466
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECOUT (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain UTI89 / UPEC) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECOLI (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain K12) GN=asnS PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECOLC (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECOL6 (Asparaginyl-tRNA synthetase OS=Escherichia coli O6 GN=asnS PE=3 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECOL5 (Asparaginyl-tRNA synthetase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECOHS (Asparaginyl-tRNA synthetase OS=Escherichia coli O9:H4 (strain HS) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECO57 (Asparaginyl-tRNA synthetase OS=Escherichia coli O157:H7 GN=asnS PE=3 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTEAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464
BLAST of FC929270 vs. ExPASy Swiss-Prot
Match: SYN_ECO24 (Asparaginyl-tRNA synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=asnS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.398e-58 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 9 LLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMILFATGIDNIRDVIPFPRYPGRA 581 +L+ DDM+F A+ DK ++RL F ++ YT G+ FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I + TG+ N+RDVIPFPR P A Sbjct: 277 VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENC---GRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNA 464 The following BLAST results are available for this feature:
BLAST of FC929270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929270 ID=FC929270; Name=FC929270; organism=Citrus clementina; type=EST; length=822bpback to top |