FC929318

Overview
NameFC929318
Unique NameFC929318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKB1B_HUMAN (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Homo sapiens GN=FKBP1B PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            KG    VHY G L +G  FDSS +R  P +F +G   VIKG+++G   M +G++ KL     + YGA G P  IP  ATLIFD EL+ +
Sbjct:   19 KGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL 107          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKB1B_BOVIN (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Bos taurus GN=FKBP1B PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            KG    VHY G L +G  FDSS +R  P +F +G   VIKG+++G   M +G++ KL     + YGA G P  IP  ATLIFD EL+ +
Sbjct:   19 KGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL 107          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_ASHGO (FK506-binding protein 3 OS=Ashbya gossypii GN=FPR3 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            A KG ++ + Y GKL +G VFD +   G P  F+LG G VIKGWD G+ GM VG +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  329 AKKGARVGMRYIGKLKNGKVFDKNTS-GKPFVFKLGHGEVIKGWDIGVAGMAVGGERRIVIPAAYAYGKQ-ALPGIPANSELTFDVKLVSL 417          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKB1B_MOUSE (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Mus musculus GN=Fkbp1b PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            KG    VHY G L +G  FDSS +R  P +F +G   VIKG+++G   M +G++ KL     + YGA G P  IP  ATLIFD EL+++
Sbjct:   19 KGQICVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGTAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLSL 107          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKB1A_XENLA (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Xenopus laevis GN=fkbp1a PE=3 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            KG  + VHY G L +G  FDSS +R  P +F +G   VI+GW++G+  M VG++ +L       YGA G P  IP  ATL FD EL+
Sbjct:   19 KGQTVVVHYVGSLENGKKFDSSRDRNKPFKFIIGRCEVIRGWEEGVAQMSVGQRARLTCSPDFAYGATGHPGIIPPNATLTFDVELL 105          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBPH_SCHPO (Probable peptidyl-prolyl cis-trans isomerase C27F1.06c OS=Schizosaccharomyces pombe GN=SPAC27F1.06c PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  114 VTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            V E  + V+ K K     A +  ++ + Y G+LT+G VFD +   G P  F LG   VIKGWD G++GM VG +R + IPA + YG++   P IP  + L+FD +L+ VN
Sbjct:  255 VLEGNVTVQDKVKGDGPAAKRKKRVSMRYIGRLTNGKVFDKNIT-GKPFTFNLGLEEVIKGWDVGIVGMQVGGERTIHIPAAMAYGSK-RLPGIPANSDLVFDVKLLAVN 362          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKB1B_RAT (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Rattus norvegicus GN=Fkbp1b PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            KG    VHY G L +G  FDSS +R  P +F +G   VIKG+++G   M +G++ KL     + YGA G P  IP  ATLIFD EL+ +
Sbjct:   19 KGQICVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL 107          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: MIP_COXBU (Peptidyl-prolyl cis-trans isomerase Mip OS=Coxiella burnetii GN=mip PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.056e-14
Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 3
Query:   99 NKSGDVTELQIGVKYKPKTCDIQAHKG------DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            NK G V  L  G++YK     +QA +G      D++ V+Y G+L +GTVFDSS++RG P  F L S  VIKGW + L  M  G   ++ +P +L YG QG+P  I     LIF   L++V  K
Sbjct:  115 NKPG-VKTLANGLQYKV----LQAGQGQSPTLNDEVTVNYEGRLINGTVFDSSYKRGQPATFPLKS--VIKGWQEALTRMKPGAIWEIYVPPQLAYGEQGAPGVIGPNEALIFKVNLISVKKK 230          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP3_CANAL (FK506-binding protein 3 OS=Candida albicans GN=FPR3 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.056e-14
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            A  G K+ + Y GKL +G VFD +   G P  F+LG G  IKG+D G+ GM VG +R++ IP K+GYG+Q + P IP  + L FD +LV++
Sbjct:  337 AKSGAKVGIRYIGKLKNGKVFDKNTS-GKPFSFKLGKGECIKGFDLGVTGMAVGGERRVIIPPKMGYGSQ-ALPGIPANSELTFDIKLVSL 425          
BLAST of FC929318 vs. ExPASy Swiss-Prot
Match: FKBP4_CANGA (FK506-binding protein 4 OS=Candida glabrata GN=FPR4 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 3
Query:  165 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            +A KG K+ + Y GKL +G VFD +   G P  F+L  G VIKGWD G+ GM +G +R++ IPA   YG Q + P IP  + L FD +LV++
Sbjct:  308 KAKKGSKVGMRYIGKLKNGKVFDKNTS-GKPFYFKLHRGEVIKGWDIGVTGMAIGGERRIVIPAPYAYGKQ-TLPGIPANSELTFDVKLVSL 397          
The following BLAST results are available for this feature:
BLAST of FC929318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKB1B_HUMAN4.741e-1544.94Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Homo... [more]
FKB1B_BOVIN4.741e-1544.94Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Bos ... [more]
FKBP3_ASHGO6.192e-1547.25FK506-binding protein 3 OS=Ashbya gossypii GN=FPR3... [more]
FKB1B_MOUSE6.192e-1544.94Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Mus ... [more]
FKB1A_XENLA6.192e-1544.83Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Xeno... [more]
FKBPH_SCHPO8.087e-1540.91Probable peptidyl-prolyl cis-trans isomerase C27F1... [more]
FKB1B_RAT8.087e-1544.94Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Ratt... [more]
MIP_COXBU1.056e-1441.46Peptidyl-prolyl cis-trans isomerase Mip OS=Coxiell... [more]
FKBP3_CANAL1.056e-1446.15FK506-binding protein 3 OS=Candida albicans GN=FPR... [more]
FKBP4_CANGA1.379e-1445.65FK506-binding protein 4 OS=Candida glabrata GN=FPR... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DF09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929318 ID=FC929318; Name=FC929318; organism=Citrus clementina; type=EST; length=740bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCGCAAAAAAAAAAAAAAAAA
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