FC929360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 59/216 (27.31%), Postives = 94/216 (43.52%), Query Frame = 1 Query: 223 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKA--------FQKSYYTRYGGGAN-ELADGYST--------GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQW------------LFWV---GPFIGAAIAAF 774 + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA LV F+++++ G + +LA +ST A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G V AW W F V P +GA + AF Sbjct: 44 ISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFSPIVGAIVGAF 249
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 50/175 (28.57%), Postives = 76/175 (43.43%), Query Frame = 1 Query: 211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN---------ELADGYST--------GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 684 G+ + I W G + + +Y +AG+SG H+NPAV+ L+L + Y+ AQ GA LV S + + N LA +ST G E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR G Sbjct: 43 GLWEISIIWGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRG---PLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11 Identity = 44/177 (24.86%), Postives = 75/177 (42.37%), Query Frame = 1 Query: 250 MIFVLVYCTAGISGGHINPAVTFGLFLA--RKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAF 774 ++FV + G NP + A SL + + AQ GA+ G + + Y GG + D ++ G AE++ TFV+ V + P++ I + L+ TG +NPA + G A + N+ W+ +++W+ PFIGA +AA+ Sbjct: 57 LLFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPAQYRHMLGGPSLKVDPHT---GAGAELVLTFVITLAVLLII-----VKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAW 225
BLAST of FC929360 vs. ExPASy Swiss-Prot
Match: AQP9_RAT (Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.342e-11 Identity = 58/206 (28.16%), Postives = 87/206 (42.23%), Query Frame = 1 Query: 217 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGG--------------ANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVP-VLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWL-----FWVGPFIGAAIAAF 774 GI+ I F + + +Y T GISGGHINPAV+F + ++ + Y+ AQ LGA G V + GG A A ST +++ T L+ VF+ D +R+ VP L P+ IG + ++ + +G +NPAR L ++ W + FW P +G I AF Sbjct: 56 GIITINIGFASAVVMALYVTFGISGGHINPAVSFAMCAFGRMEWFKFPFYVGAQFLGAFVGAATVFGIYYDGLMAFAGGKLLVVGENATAFIFATYPAPFISTPGAFVDQVVSTMFLLLIVFAMFD----SRNLGVPRGLEPVVIGLLIIVLSCSLGLNSGCAMNPARDLSPR-LFTALAGWGFEVFTVGNNFWWIPVVGPMIGAF 256 The following BLAST results are available for this feature:
BLAST of FC929360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929360 ID=FC929360; Name=FC929360; organism=Citrus clementina; type=EST; length=812bpback to top |