FC929422

Overview
NameFC929422
Unique NameFC929422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15039 contig Ccv1_Contig15039:1..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_ZYGBA (Inorganic pyrophosphatase OS=Zygosaccharomyces bailii GN=IPP1 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.133e-49
Identity = 95/187 (50.80%), Postives = 131/187 (70.05%), Query Frame = -3
Query:  255 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLV 800
            +V    R ++AK+E+  +E   PI QD KKGKLRY    +P++    NYG FPQTWEDP+  + E + A GDNDPVDV+EIGE     G++ +VK L  +A++DEGE DWK++AI ++DP A  ++D++DVEK+FPG L A  +WFR YKIPDGKP N+F    +A +K YAL +I ET+ESW +L+
Sbjct:   46 MVVEIPRWTNAKLEITKEENLNPIIQDTKKGKLRYVRNCFPHHGYIHNYGAFPQTWEDPNVVHPETK-AVGDNDPVDVLEIGETIGYTGQVKQVKVLGIMALLDEGETDWKVIAIDVNDPLAPKLHDIEDVEKYFPGQLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIRETHESWKQLI 231          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_ASHGO (Inorganic pyrophosphatase OS=Ashbya gossypii GN=IPP1 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.133e-49
Identity = 95/187 (50.80%), Postives = 129/187 (68.98%), Query Frame = -3
Query:  255 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLV 800
            +V    R ++AK+E+  +E   PI QD KKGKLRY    +P++    NYG FPQTWEDP+ A+ E + A+GDNDP+DV+EIGE     G++ +VK L  +A++DEGE DWKI+ I + DP A  +ND++DVEKH PG L A  +WFR YKIPDGKP N+F    +A ++ YAL VI E +E+W +LV
Sbjct:   46 MVVEIPRWTNAKLEITKEEAMNPIIQDTKKGKLRYVRNCFPHHGYIHNYGAFPQTWEDPNVAHPETK-AYGDNDPLDVLEIGETIAYTGQVKQVKVLGVMALLDEGETDWKIIVIDVHDPLAPKLNDIEDVEKHLPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNRKYALDVIRECHEAWCQLV 231          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_EMENI (Inorganic pyrophosphatase OS=Emericella nidulans GN=ipp1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.046e-48
Identity = 94/192 (48.96%), Postives = 130/192 (67.71%), Query Frame = -3
Query:  222 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELSL 782
            R ++AK E++ +E   PIKQD KKGKLR+    +P+    WNYG FPQTWEDP+  + E + A GDNDP+DV EIGE     G++ +VK L  +A++DE E DWK++ I ++DP A  +ND++DVE+H PG L A  +WFR YKIPDGKP N+F    +A +K YA +VI E  ++W KLV    + G++SL
Sbjct:   52 RWTNAKQEISKEEFLNPIKQDTKKGKLRFVRNCFPHKGYLWNYGAFPQTWEDPNVVHPETK-AKGDNDPLDVCEIGELVGYPGQVKQVKVLGVMALLDEEETDWKVIVIDVNDPLAPKLNDIEDVERHLPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYAEEVIHECADAWEKLVSGKSDRGDISL 242          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_DROME (Inorganic pyrophosphatase OS=Drosophila melanogaster GN=Nurf-38 PE=1 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 1.046e-48
Identity = 96/197 (48.73%), Postives = 131/197 (66.50%), Query Frame = -3
Query:  225 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELS 800
            +V    R ++AKME++      PIKQDIKKGKLR+    +P+    WNYG  PQTWE+P        G  GDNDP+DV+EIG R  K G++L+VK L  +A+IDEGE DWKI+AI ++DP A+ VND+ DV+++FPG L A  +WF+ YKIPDGKP N+F     A + D+A  +I ET++ W  LV +S  +G +S
Sbjct:   96 MVVEVPRWTNAKMEISLKTPMNPIKQDIKKGKLRFVANCFPHKGYIWNYGALPQTWENPDHIEPST-GCKGDNDPIDVIEIGYRVAKRGDVLKVKVLGTIALIDEGETDWKIIAIDVNDPLASKVNDIADVDQYFPGLLRATVEWFKIYKIPDGKPENQFAFNGDAKNADFANTIIAETHKFWQNLVHQSPASGSIS 291          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_CAEEL (Probable inorganic pyrophosphatase 1 OS=Caenorhabditis elegans GN=pyp-1 PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 1.046e-48
Identity = 96/184 (52.17%), Postives = 128/184 (69.57%), Query Frame = -3
Query:  246 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRS 782
            R ++AKME+AT E ++PIKQD KKG  R+    +P+    WNYG  PQTWEDP+    +  GA GDNDP+DV+E+G +    G +L+VK L  LA+IDEGE DWK+VAI ++D  A  +ND+DDVEK +PG L A  +WFR+YKIP GKPAN+F    +  +++YA KVI ETNE W  L+K +
Sbjct:  175 RWTNAKMEMATKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDT-GAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVIDETNEYWKTLIKEA 357          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_NEUCR (Inorganic pyrophosphatase OS=Neurospora crassa GN=ipp-1 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.044e-48
Identity = 93/197 (47.21%), Postives = 130/197 (65.99%), Query Frame = -3
Query:  225 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELS 800
            +V    R ++AK E++ +EL  PIKQD KKGKLR+    +P+    WNYG FPQTWEDP+  + E + A GDNDP+DV EIGE     G++ +VK L  +A++DE E DWK++ I ++DP A  +NDV+DVE+H PG + A  +WFR YKIPDGKP N+F    +  +K YA+ V+ E NE+W +L+      G +S
Sbjct:   48 MVVEIPRWTNAKQEISKEELLNPIKQDTKKGKLRFVRNCFPHKGYLWNYGAFPQTWEDPNSIHPETK-AKGDNDPLDVCEIGELVGYTGQVKQVKVLGVMALLDEEETDWKVIVIDVNDPLAPKLNDVEDVERHLPGLIRATNEWFRIYKIPDGKPENQFAFTGECKNKTYAMDVVRECNEAWERLITGKTAPGGVS 243          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR2_MOUSE (Inorganic pyrophosphatase 2, mitochondrial OS=Mus musculus GN=Ppa2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.856e-48
Identity = 94/199 (47.24%), Postives = 127/199 (63.82%), Query Frame = -3
Query:  219 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRYYPY-----NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELSLV 800
            +V    R ++AKME+AT+E   PIKQDIK GKLRY P         WNYG  PQTWEDP   +   +   GDNDP+DV EIG +    G+++ VK L  LA+ID+ E DWKI+AI+++DP+A   +D+DDV+K  PG L A  +WFR YK+PDGKP NKF    +  +K +AL VI   +E W ++V +  + G +S V
Sbjct:   89 MVVEIPRWTNAKMEIATEEPLNPIKQDIKNGKLRYTPNIFPHKGYIWNYGALPQTWEDPHLRDKSTD-CCGDNDPIDVCEIGSKVLSRGDVVHVKILGTLALIDQSETDWKIIAINVNDPEAEKFHDIDDVKKFKPGYLEATLNWFRLYKVPDGKPENKFAFNGEFKNKAFALDVINSAHERWKEMVMKKCDKGAISCV 286          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_PICPA (Inorganic pyrophosphatase OS=Pichia pastoris GN=IPP1 PE=3 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 1.157e-47
Identity = 95/198 (47.98%), Postives = 131/198 (66.16%), Query Frame = -3
Query:  222 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELSL 800
            +V    R ++AK+E++ +E   PI QD KKGKLR+    +P++    NYG FPQTWEDP+  + E + A GDNDP+DV EIGER    G++ +VK L  +A++DEGE DWK++ I ++DP A  +ND++DVEKH PG L A  +WFR YKIPDGKP N+F    +  +K YA +VI E  E+W KL+      GE+ L
Sbjct:   46 MVVEVPRWTNAKLEISKEEKLNPILQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVTHPETK-AKGDNDPLDVCEIGERSYT-GQVKQVKVLGVMALLDEGETDWKVIVIDINDPLAPKLNDIEDVEKHMPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYAEEVIQECREAWEKLIFGKTSPGEIDL 241          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_SCHPO (Inorganic pyrophosphatase OS=Schizosaccharomyces pombe GN=ppa1 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.973e-47
Identity = 92/206 (44.66%), Postives = 135/206 (65.53%), Query Frame = -3
Query:  201 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEA-GELSLV*LQLIG 800
            +V    R + AK+E+  +    PIKQD KKGKLR+    +P++   WNYG FPQT+EDP+  + E + A GD+DP+DV EIGE R   G++ +VK L  +A++DEGE DWK++ I ++DP A  +ND++DVE+H PG + A  +WFR YKIPDGKP N F    +  ++ YA +V+ E NE+W +L+    +A  + SLV + + G
Sbjct:   47 MVVEIPRWTQAKLEITKEATLNPIKQDTKKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETK-AKGDSDPLDVCEIGEARGYTGQVKQVKVLGVMALLDEGETDWKVIVIDVNDPLAPKLNDIEDVERHMPGLIRATNEWFRIYKIPDGKPENSFAFSGECKNRKYAEEVVRECNEAWERLITGKTDAKSDFSLVNVSVTG 251          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_DEBHA (Inorganic pyrophosphatase OS=Debaryomyces hansenii GN=IPP1 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.577e-47
Identity = 90/182 (49.45%), Postives = 128/182 (70.33%), Query Frame = -3
Query:  252 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVK 782
            R ++AK+E++ +E   PI QD KKGKLR+    +P++    NYG FPQTWEDP+  + E + A GDNDP+DV EIGE+   +G++ +VK L  +A++DEGE DWKI+ I ++DP A+ +ND++DVE H PG L A  +WFR YKIPDGKP N+F    +  +K YA ++I E +E+W KL+K
Sbjct:   52 RWTNAKLEISKEEKLNPILQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNQVHPETK-AKGDNDPLDVCEIGEQVGYVGQVKQVKVLGVMALLDEGETDWKIIVIDVNDPLASKLNDIEDVETHLPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYAEEIINECSEAWEKLIK 232          
The following BLAST results are available for this feature:
BLAST of FC929422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
IPYR_ZYGBA6.133e-4950.80Inorganic pyrophosphatase OS=Zygosaccharomyces bai... [more]
IPYR_ASHGO6.133e-4950.80Inorganic pyrophosphatase OS=Ashbya gossypii GN=IP... [more]
IPYR_EMENI1.046e-4848.96Inorganic pyrophosphatase OS=Emericella nidulans G... [more]
IPYR_DROME1.046e-4848.73Inorganic pyrophosphatase OS=Drosophila melanogast... [more]
IPYR_CAEEL1.046e-4852.17Probable inorganic pyrophosphatase 1 OS=Caenorhabd... [more]
IPYR_NEUCR3.044e-4847.21Inorganic pyrophosphatase OS=Neurospora crassa GN=... [more]
IPYR2_MOUSE8.856e-4847.24Inorganic pyrophosphatase 2, mitochondrial OS=Mus ... [more]
IPYR_PICPA1.157e-4747.98Inorganic pyrophosphatase OS=Pichia pastoris GN=IP... [more]
IPYR_SCHPO1.973e-4744.66Inorganic pyrophosphatase OS=Schizosaccharomyces p... [more]
IPYR_DEBHA2.577e-4749.45Inorganic pyrophosphatase OS=Debaryomyces hansenii... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2BH10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929422 ID=FC929422; Name=FC929422; organism=Citrus clementina; type=EST; length=835bp
TTTTTTTTTTCCGAGCTACACCCCAAGTATTTTATTCCACGACGTGACTG
AAATTAAAGGATTCAAAATAATGTTCAAATCCGCAAAAAAATGGTTCTTC
AATTTTGTTCATCACATGTAGTACATAATGCAAGCAGCTACATGATCAAT
AGACAATCCAAAACTCAACAATGGGAGAGAAGTAGCCGAGCTGCACCAAC
TCCGATGAGTTGCAGTTATACAAGCGATAGCTCGCCAGCCTCAATCGACC
TCTTTACAAGTTTAGCCCATGATTCGTTTGTCTCGGTGATCACCTTTAAA
GCATAATCCTTGTCTGCAGCCTTGTTGCCGAGACCAAACTTGTTGGCAGG
CTTTCCGTCGGGGATCTTGTAGTCTCTAAACCAGTCCCTGATCGCCGTGA
GAGTTCCAGGAAAATGCTTCTCGACATCATCAACATCGTTTACAAGGGCA
GCCTTTGGATCATCCAATGAAATTGCCACTATTTTCCAGTCAAGTTCACC
TTCATCAATCATGGCTAAGGCACTCAAGGGCTTGACCCTAAGAATTTCAC
CAATCTTTCTCCTTCTTTCACCAATCTCAACAACATCAACTGGATCATTA
TCCCCAAATGCCCCTTCAACTTCAGAGTTTGCAAAAGATGGATCTTCCCA
TGTTTGTGGAAACAATCCATAATTCCAATTTATGTTGTATGGGTAGTATC
GAAGCTTCCCCTTCTTTATATCCTGTTTAATAGGGGTGTATAGCTCATCA
GTAGCAACCTCCATCTTTGCACTTGATCCTCGTGCCGAATTCGGCACGAG
GAGAGAGTCGGTTAGCCAAACAAAACGAAAGTAAA
back to top