FC929422

Overview
NameFC929422
Unique NameFC929422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15039 contig Ccv1_Contig15039:1..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR2_HUMAN (Inorganic pyrophosphatase 2, mitochondrial OS=Homo sapiens GN=PPA2 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.365e-47
Identity = 93/197 (47.21%), Postives = 128/197 (64.97%), Query Frame = -3
Query:  207 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELSLV*LQL 782
            R ++AKME+AT E   PIKQ +K GKLRY    +PY    WNYG  PQTWEDP   +      FGDNDP+DV EIG +    GE++ VK L  LA+IDEGE DWK++AI+ +DP+A+  +D+DDV+K  PG L A  +WFR YK+PDGKP N+F    +  +K +AL+VI  T++ W  L+ +    G ++   +Q+
Sbjct:  100 RWTNAKMEIATKEPMNPIKQYVKDGKLRYVANIFPYKGYIWNYGTLPQTWEDPHEKDKSTN-CFGDNDPIDVCEIGSKILSCGEVIHVKILGILALIDEGETDWKLIAINANDPEASKFHDIDDVKKFKPGYLEATLNWFRLYKVPDGKPENQFAFNGEFKNKAFALEVIKSTHQCWKALLMKKCNGGAINCTNVQI 295          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_CANAL (Inorganic pyrophosphatase OS=Candida albicans GN=IPP1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.497e-47
Identity = 90/182 (49.45%), Postives = 127/182 (69.78%), Query Frame = -3
Query:  252 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVK 782
            R ++AK+E++ ++   PI QD KKGKLR+    +P++    NYG FPQTWEDP+ ++ E + A GDNDP+DV EIGE+   +GE+ +VK L  +A++DEGE DWK++ I ++DP A  +ND++DVE H PG L A  +WFR YKIPDGKP N+F    +  +K YA +VI E  E+W KL+K
Sbjct:   53 RWTNAKLEISKEQKLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNQSHPETK-AKGDNDPLDVCEIGEKVATVGEVKQVKVLGVMALLDEGETDWKVIVIDVNDPLAPKLNDIEDVETHLPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYAEEVIGECAEAWEKLIK 233          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_YARLI (Inorganic pyrophosphatase OS=Yarrowia lipolytica GN=IPP1 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.721e-46
Identity = 92/181 (50.83%), Postives = 123/181 (67.96%), Query Frame = -3
Query:  255 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLV 782
            R ++AKME++ D    PI QD KKGKLR+    +P++    NYG FPQTWEDP+  + E + A GDNDP+DV EIGE     G++ +VK L  +A++DEGE DWKI+AI + DP A+ VND++DVE+H PG L A  +WFR YKIPDGKP N+F    +  +K YA +VI E  E+W  L+
Sbjct:   53 RWTNAKMEISKDLALNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNHVHPETK-AKGDNDPLDVCEIGETVGYTGQVKQVKVLGVMALLDEGETDWKIIAIDVKDPLASKVNDIEDVERHLPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYADEVIRECEEAWETLI 232          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_DICDI (Inorganic pyrophosphatase OS=Dictyostelium discoideum GN=ppa1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.948e-43
Identity = 84/176 (47.73%), Postives = 110/176 (62.50%), Query Frame = -3
Query:  255 RGSSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLV 782
            RG++AK+E+AT E   PIKQD+K GKLR+      +NYG  PQTWE P   +    GA GDNDP+D  EIG  +   GE  +VK L   AMID GE DWKI+ I ++DP A+ +N  +D+EKH PG +  +  + RDYKIPDGK  N+F    K    D+++K+I ET   W  LV
Sbjct:   73 RGTNAKLEIATKEYMNPIKQDVKDGKLRFVHDKYPFNYGALPQTWESPEHTHPST-GAKGDNDPLDACEIGSGQGVTGEFKQVKVLGVFAMIDAGETDWKILCIDVNDPIASQINSQEDIEKHLPGKINEVYTFLRDYKIPDGKGPNQFAFDGKLQSIDFSMKIIEETEAEWKDLV 247          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_ENCCU (Inorganic pyrophosphatase OS=Encephalitozoon cuniculi GN=IPP1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.257e-42
Identity = 80/181 (44.20%), Postives = 116/181 (64.09%), Query Frame = -3
Query:  255 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLV 782
            R  + K E+  +E + PIKQDIKKG  R+    +P     WNYG  PQTWE+P   +    GA GDNDP+DV+EIG +R+++GE+ + K L ++A++DEGE DWK+V I ++D KA  +ND++DV K + G L     WF++YK+PDGKP N F L  K  DK + + +I    E+W  ++
Sbjct:   53 RFENGKFEINKEEAFNPIKQDIKKGWPRFVKNVFPMKGYLWNYGALPQTWENPHEVDRHT-GARGDNDPLDVIEIGRKRKEVGEVYQAKVLGSIALVDEGECDWKVVVIDVNDEKAKEINDIEDVRKVYEGLLEQTIFWFKNYKVPDGKPKNNFALDGKYMDKKFTVGIIKSAYENWCGMI 232          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR2_SCHPO (Putative inorganic pyrophosphatase C3A12.02 OS=Schizosaccharomyces pombe GN=SPAC3A12.02 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.759e-41
Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = -3
Query:  267 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESW 800
            +V    R + AK E++    + PIKQD+K GKLRY    +PY+   WNYG  PQTWEDP+  +S  +   GD DP+DV EIG     IG+I +VK L AL +ID+GE DWKI+AI ++DP+A L+ND+ DV+   P  L   RDWF  YKIPDGKP N+F        K  AL +I + ++ W
Sbjct:   52 MVTEIPRWTQAKCEISLTSPFHPIKQDLKNGKLRYVANSFPYHGFIWNYGALPQTWEDPNVIDSRTKMK-GDGDPLDVCEIGGSIGYIGQIKQVKVLGALGLIDQGETDWKILAIDINDPRAKLLNDISDVQNLMPRLLPCTRDWFAIYKIPDGKPKNRFFFDGNYLPKSDALDIIAQCHQHW 233          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR2_YEAST (Inorganic pyrophosphatase, mitochondrial OS=Saccharomyces cerevisiae GN=IPP2 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.417e-37
Identity = 75/189 (39.68%), Postives = 120/189 (63.49%), Query Frame = -3
Query:  240 RGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANS--EVEGAF-GDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIE 782
            R ++ K E++ +  + PI QD K GKLR+    +PY+    NYG  PQTWEDP+  +   + + A  GDNDP+D  EIG    ++G I +VK L +LA+ID+GELDWK++ I ++DP ++ ++D++ +E++FPG L   R+WFR YK+P GKP N F    +  + +  ++ I + + SW  L+  S++
Sbjct:   84 RWTTGKFEISKELRFNPIVQDTKNGKLRFVNNIFPYHGYIHNYGAIPQTWEDPTIEHKLGKCDVALKGDNDPLDCCEIGSDVLEMGSIKKVKVLGSLALIDDGELDWKVIVIDVNDPLSSKIDDLEKIEEYFPGILDTTREWFRKYKVPAGKPLNSFAFHEQYQNSNKTIQTIKKCHNSWKNLISGSLQ 272          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_PLAF7 (Probable inorganic pyrophosphatase OS=Plasmodium falciparum (isolate 3D7) GN=PFC0710w PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.241e-33
Identity = 75/167 (44.91%), Postives = 103/167 (61.68%), Query Frame = -3
Query:  294 KMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDP-------SFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFG--LGNKAADKDYALK 767
            K+E+   E +  IKQD KKGKLRYY  +I WNYG  PQT+E P       S  N E     GDNDP+D+++IG    KIG+++ VK L A  +IDEGELDWKI+AI+ +D     +N + D+EK++P TL+ + +WFR YK+ D K  N     L +K   +D  +K
Sbjct:  136 KLEIQLREKFNVIKQDKKKGKLRYYHNSIYWNYGALPQTYEYPKHIYQNKSKKNKEALLFTGDNDPLDILDIGSACLKIGQVVPVKILGAFTLIDEGELDWKIIAINKEDKHYEDINSLSDIEKYYPHTLSLLLEWFRSYKMADTKKLNLISKQLYDKKESEDLIMK 302          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_PYRKO (Inorganic pyrophosphatase OS=Pyrococcus kodakaraensis GN=ppa PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 47/153 (30.72%), Postives = 70/153 (45.75%), Query Frame = -3
Query:  261 IKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAK 719
            +K  ++ Y P+    +YG+ PQTW D             D DP D++ I         I+  +P+  + M D G+ DWK++A+ ++DP      D+DDV K F   L  I  +F+ YK   GK     G GN    K   L+ I    E + K
Sbjct:   40 LKLDRVLYSPFFYPVDYGIIPQTWYD-------------DGDPFDIMVIMREPVYPLTIVEARPIGIMKMEDSGDKDWKVLAVPVEDPYFKDWKDIDDVPKAF---LDEIAHFFQRYKELQGKTTTVEGWGNAEEAKKEILRAIELYKEKFGK 176          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_THELI (Inorganic pyrophosphatase OS=Thermococcus litoralis GN=ppa PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.996e-12
Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = -3
Query:  261 IKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAK 719
            IK  ++ Y P++   +YG+ PQTW D             D+DP D++ I       G ++  +P+    MID G+ D+K++A+ ++DP      D+ DV K F   L  I  +F+ YK   GK     G  N    K   L+ I    E + K
Sbjct:   40 IKLDRVLYSPFHYPVDYGIIPQTWYD-------------DDDPFDIMVIMREPTYPGVLIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFNDWKDISDVPKAF---LDEIAHFFQRYKELQGKEIIVEGWENAEKAKQEILRAIELYKEKFKK 176          
The following BLAST results are available for this feature:
BLAST of FC929422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
IPYR2_HUMAN3.365e-4747.21Inorganic pyrophosphatase 2, mitochondrial OS=Homo... [more]
IPYR_CANAL7.497e-4749.45Inorganic pyrophosphatase OS=Candida albicans GN=I... [more]
IPYR_YARLI3.721e-4650.83Inorganic pyrophosphatase OS=Yarrowia lipolytica G... [more]
IPYR_DICDI2.948e-4347.73Inorganic pyrophosphatase OS=Dictyostelium discoid... [more]
IPYR_ENCCU4.257e-4244.20Inorganic pyrophosphatase OS=Encephalitozoon cunic... [more]
IPYR2_SCHPO2.759e-4146.99Putative inorganic pyrophosphatase C3A12.02 OS=Sch... [more]
IPYR2_YEAST2.417e-3739.68Inorganic pyrophosphatase, mitochondrial OS=Saccha... [more]
IPYR_PLAF71.241e-3344.91Probable inorganic pyrophosphatase OS=Plasmodium f... [more]
IPYR_PYRKO1.208e-1230.72Inorganic pyrophosphatase OS=Pyrococcus kodakaraen... [more]
IPYR_THELI5.996e-1230.07Inorganic pyrophosphatase OS=Thermococcus litorali... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2BH10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929422 ID=FC929422; Name=FC929422; organism=Citrus clementina; type=EST; length=835bp
TTTTTTTTTTCCGAGCTACACCCCAAGTATTTTATTCCACGACGTGACTG
AAATTAAAGGATTCAAAATAATGTTCAAATCCGCAAAAAAATGGTTCTTC
AATTTTGTTCATCACATGTAGTACATAATGCAAGCAGCTACATGATCAAT
AGACAATCCAAAACTCAACAATGGGAGAGAAGTAGCCGAGCTGCACCAAC
TCCGATGAGTTGCAGTTATACAAGCGATAGCTCGCCAGCCTCAATCGACC
TCTTTACAAGTTTAGCCCATGATTCGTTTGTCTCGGTGATCACCTTTAAA
GCATAATCCTTGTCTGCAGCCTTGTTGCCGAGACCAAACTTGTTGGCAGG
CTTTCCGTCGGGGATCTTGTAGTCTCTAAACCAGTCCCTGATCGCCGTGA
GAGTTCCAGGAAAATGCTTCTCGACATCATCAACATCGTTTACAAGGGCA
GCCTTTGGATCATCCAATGAAATTGCCACTATTTTCCAGTCAAGTTCACC
TTCATCAATCATGGCTAAGGCACTCAAGGGCTTGACCCTAAGAATTTCAC
CAATCTTTCTCCTTCTTTCACCAATCTCAACAACATCAACTGGATCATTA
TCCCCAAATGCCCCTTCAACTTCAGAGTTTGCAAAAGATGGATCTTCCCA
TGTTTGTGGAAACAATCCATAATTCCAATTTATGTTGTATGGGTAGTATC
GAAGCTTCCCCTTCTTTATATCCTGTTTAATAGGGGTGTATAGCTCATCA
GTAGCAACCTCCATCTTTGCACTTGATCCTCGTGCCGAATTCGGCACGAG
GAGAGAGTCGGTTAGCCAAACAAAACGAAAGTAAA
back to top