FC929480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UPL5_ARATH (E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana GN=UPL5 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.874e-14 Identity = 72/280 (25.71%), Postives = 113/280 (40.36%), Query Frame = 2 Query: 5 FDVQYGLFKETSDHL--LYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE----LELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQ-----KDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATC 811 F+ + LF ++D PNP S + H FF F G ++A A+ + V + F F +L L D+ D +Y + + + + L L FV+ E G++ EL P GK V ++N ++ L+ R I +Q F RGF ++ + + + + +T Y G+ I+ FW++LK + E Q+ L F T P+ GF+ L I R EA DRLP S TC Sbjct: 567 FNPKNTLFLRSADDFRRFSPNPAS-KVDPLHPDFFEFTGRVIALALMHKVQVGVLFDRVFFLQLAGLKISLEDIKDTDRIMYNSCKQILEMDPEFFDSNAGLGLTFVLETEELGKRDTIELCPDGKLKAVNSKNRKQYVDLLIERRFATPILEQVKQFSRGFTDMLSHSVPPRSFFKRLYLEDLDGMLRGGENPISIDDWKAHTEY-NGFKETDRQIDWFWKILKKMTEEEQRSILFFWTSNKFVPVEGFRGLSSKLYIYRL-----YEANDRLPLSHTC 839
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13 Identity = 76/281 (27.05%), Postives = 120/281 (42.70%), Query Frame = 2 Query: 71 GMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPEL------YRHLIFLKHY--------EADISELELYFVILNNEYGEQT----EEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGS----------ASEEALDRLPTSATCMNLLKL 829 G H+ +++F LG ++AKA+ +G L+D+P +T F + + L+D+ D EL R ++ KHY + IS+L L + + E T E +L G I V N+ +I LV + + + +Q F GF Q+ + +F E ++ + GY+++ I E++ + + Q+ F +FVTG R P G L P I R S ASE A D LP+ TC N LKL Sbjct: 1583 GQFHKV-IEYFRLLGRVMAKALQDGRLLDVPLSTAFYKLILGQELDLHDIVLFDAELGKTLQELRVVVARKHYLEGVGGDNSSTISDLCLRGCRIEDLSLEFTLPGYPEYILRSGDEI-VDITNLEEYISLVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTSSAAANGAGASETADDDLPSVMTCANYLKL 1861
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13 Identity = 64/273 (23.44%), Postives = 117/273 (42.86%), Query Frame = 2 Query: 50 LYPNP----GSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLK---------HYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 L+P+P GS +E+ + F LG +A+++++ ++ I F F ++ ++ + +D L L +L+ + E DI +L+ L+ EL+P G + VT NV +++ V ++ + ++QQ F GF + + + EHE ++ GY E I+ ++ + + Q+ FL+F+TG + P+ GF L P + R D LP+ TC+N LKL Sbjct: 1353 LFPSPIPLLGSSPENERKISLFFALGQFVARSIYDSRIISIQFNPLFFAR--NIPLTISSVAKVDKGLANSLRYLEKLIPGKNPTNAETDIKLEDLH---LDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKL 1620 The following BLAST results are available for this feature:
BLAST of FC929480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929480 ID=FC929480; Name=FC929480; organism=Citrus clementina; type=EST; length=829bpback to top |