FC929584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PP G ++N + +W + G GT + + TF+L ++F E YP + P V FL HP++Y++G ICLDIL + WSP VSS+ SI S+L Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLL 113
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PP G ++N + +W + G GT + + TF+L ++F E YP + P V FL HP++Y++G ICLDIL + WSP VSS+ SI S+L Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLL 113
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ KEL + Q +PP V +++ W + G + Y+ F + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 46/112 (41.07%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +A R+ +EL + +PP+ V D+L W + G + YA F L + FP YP + P+V F HP+I SNG ICLDIL D WSPA+T+S V +SI S+L+ Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRI-YHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLT 111
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15 Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +A R+ KEL + +PP+ V ++L W + G + YA F L + FP YP + P+V F HP+I SNG ICLDIL D WSPA+T+S V +SI SML+ Sbjct: 1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRI-YHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLT 111
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ KEL + Q +PP V +++ W + G + Y+ F + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15 Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKH--KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVK 423 +SK A RL KEL + + P G K +N+ W + G P T YA+ F +++FP+ YP+ P++ F P+ LHP+IY NG +C+ IL+ + WSP +V + +S++SMLS ++ Sbjct: 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTF-TPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIE 133
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ KEL + Q +PP V +++ W + G + Y+ F + + FP YP + P+V F HP++ SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PPAG ++N + W + G GT + + TF+L ++F E YP + P V F+ HP++Y++G ICLDIL + WSP VSS+ SI S+L Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLL 113
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PPAG ++N + W + G GT + + TF+L ++F E YP + P V F+ HP++Y++G ICLDIL + WSP VSS+ SI S+L Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKM-FHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLL 113 The following BLAST results are available for this feature:
BLAST of FC929584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929584 ID=FC929584; Name=FC929584; organism=Citrus clementina; type=EST; length=767bpback to top |