FC929584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.513e-14 Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T++ + I I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELLNEPNI-QEPAQAEAYTIYCQN 140
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.513e-14 Identity = 51/148 (34.46%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 79 ASNRLQKELVEWQVNPPAGFKHKVTD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRS 477 AS LQK+L + P GF + D N+ +W + + G P TLY F + FPE+YP+ P V F HP++YS+G +C+ IL+ + W+P TV S+ +SI+SMLS + PA N K R+ R+ Sbjct: 6 ASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEM-WHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPN-DESPA-NVEAAKEWRDNRA 150
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V +++ W + G + Y F L +DFP YP + P+V F HP++ SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRI-YHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLL 110
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.282e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V +++ W + G + Y F L +DFP YP + P+V F HP++ SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRI-YHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLL 110
BLAST of FC929584 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140 The following BLAST results are available for this feature:
BLAST of FC929584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929584 ID=FC929584; Name=FC929584; organism=Citrus clementina; type=EST; length=767bpback to top |