FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.854e-25
Identity = 69/182 (37.91%), Postives = 109/182 (59.89%), Query Frame = 1
Query:  304 LKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            L L I R +    G ++  N  +   D Q+    F+L +++ ATNNF  EN IG+GG+  VYKG L +G  +A+K+L+   + +   +F++E+G+++ + HPN  KL G  IEG  + +V E   N SLA  L+G +++   L W  R K+ +G+A+GL YLHE  + +I+HR   A N+LL
Sbjct:  623 LVLVILRLTGYLGGKEVDENEELRGLDLQTGS--FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLS-SKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLL 801          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.081e-24
Identity = 71/157 (45.22%), Postives = 92/157 (58.60%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIA---DFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLL---YGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K FS  E+Q+AT+NFS +N++G+GG+  VYKG L NG +VA+KRL     D I      F +E+ ++    H N  +L G+ +      +V    PNGS+A  L   YG K  L W  R  IALG A GL+YLHE C  +IIHR   AANILL E F
Sbjct:  286 KRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLK----DPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESF 438          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.081e-24
Identity = 67/147 (45.58%), Postives = 90/147 (61.22%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            F L  +  ATN FS EN +G+GG+  VYKG L +GQ +A+KRL  G+    + +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++   ++  L W +RY+I  GVA GLLYLHE  Q RIIHR   A+NILL
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGEL-EFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILL 473          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.081e-24
Identity = 74/190 (38.95%), Postives = 109/190 (57.37%), Query Frame = 1
Query:  286 LVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            LV ++ ++   +R+ + +E +    N    +   Q     F    +++ATN F   N +G+GG+ EVYKG L +G  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLGY +EG   I V E  PN SL   L+   MK KL W  RYKI  G+A G+LYLH+  +  IIHR   A NILL +D
Sbjct:  279 LVAVFSVRAKNKRTLNEKEPVAEDGNDITTAGSLQ-----FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSK-TSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDD 462          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.409e-24
Identity = 69/150 (46.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTE 843
            K F+  EL   TNNFS  N +G GGY +VYKG L NGQ++AIKR  +G+      +F +E+ +++ V H N  KLLG+   +    +V E  PNGSL   L G    KL W  R KIALG  +GL YLHE     IIHR   + NILL E
Sbjct:  620 KAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAF-EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDE 768          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.409e-24
Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-----GIEGGMHIVL-ELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            FS  E++ ATNNFS  N+IG+GGY  V+KG L +G  VA KR    +A    A+F  E+ ++A + H N   L GY       EG   I++ +L  NGSL   L+G ++ +L W +R +IALG+A GL YLH G Q  IIHR   A+NILL E F
Sbjct:  271 FSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGD-ANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERF 424          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24
Identity = 68/174 (39.08%), Postives = 95/174 (54.60%), Query Frame = 1
Query:  352 MPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK-----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            +P  L +N    + P +  +   L  ATN FS E ++G GG+ EVYK +LR+G +VAIK+L R  G  D    +F++E+  +  + H N   LLGY   G    +V E    GSL ++L+    K     L W  R KIA+G A GL +LH  C   IIHR   ++N+LL EDF
Sbjct:  829 VPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDR---EFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDF 999          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24
Identity = 60/152 (39.47%), Postives = 97/152 (63.82%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE----KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            F+L ++++AT+NF     IG+GG+  VYKG L  G+L+A+K+L+   + +   +F++E+G+++ + HPN  KL G  +EG  + +V E   N  L+  L+G  E    KL W  R KI LG+A+GL +LHE  + +I+HR   A+N+LL +D
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLS-AKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKD 816          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24
Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            IF+  EL+SAT +F   N +G+GG+  VYKG L +G++VA+K L+ G+  +    F++E+  ++ V H N  KL G   EG    +V E  PNGSL   L+G K   L W  RY+I LGVA GL+YLHE    RI+HR   A+NILL
Sbjct:  681 IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSR-QGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILL 826          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.367e-24
Identity = 66/146 (45.21%), Postives = 90/146 (61.64%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            F+  EL+SAT +F   N +G+GG+  VYKG+L +G+ VA+K L+ G+       F++E+  ++ V H N  KL G   EG   + V E  PNGSL   L+G K   L W  RY+I LGVA GL+YLHE  + RI+HR   A+NILL
Sbjct:  681 FTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGK-GQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILL 825          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
Y5344_ARATH4.854e-2537.91Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.081e-2445.22Probable LRR receptor-like serine/threonine-protei... [more]
CRK36_ARATH1.081e-2445.58Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK19_ARATH1.081e-2438.95Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y5977_ARATH2.409e-2446.00Probable leucine-rich repeat receptor-like protein... [more]
RKF3_ARATH2.409e-2445.16Probable LRR receptor-like serine/threonine-protei... [more]
BRL1_ARATH3.146e-2439.08Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y1765_ARATH4.109e-2439.47Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH4.109e-2445.58Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH5.367e-2445.21Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
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