FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.663e-23
Identity = 67/189 (35.45%), Postives = 109/189 (57.67%), Query Frame = 1
Query:  289 VTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            + L  + L I +    ++ I++P  + +N  +S      F L  +++AT NFS  N +G GG+ EVYKG L NG  +A+KRL++ T+ +   +F +E+ ++A + H N  +LLG+ ++G    +V E  PN SL   L+    + +L W +R  I  G+  G+LYLH+  + +IIHR   A+NILL  D
Sbjct:  314 IILIVVGLVICKRRKQKQEIELP--IVLNEAESVQ----FDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSK-TSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDAD 495          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23
Identity = 60/145 (41.38%), Postives = 94/145 (64.83%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            L++AT+NFS EN +G+GG+  VYKG    GQ +A+KRL+ G + +   +F +E+ ++A + H N  +L+G+ I+G   + V E   N SL   ++  +++  L W +RYK+  G+A GLLYLHE  + RIIHR   A+NILL ++
Sbjct:  350 LKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLS-GNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQE 493          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23
Identity = 76/205 (37.07%), Postives = 111/205 (54.15%), Query Frame = 1
Query:  247 LFYDLF--RNKSKKSLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            LF  +F  R K +K ++   PL    R+ + + E +    +    +   Q     F    + +ATNNF   N +G+GG+ EVYKG   +G  VA+KRL++ T+ +   +F +E+ ++A + H N  +LLGY +EG   I V E   N SL   L+   MK +L W  RYKI  G+A G+LYLH+  +  IIHR   A NILL  D
Sbjct:  446 LFVAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDSITTAGSLQ-----FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSK-TSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDAD 644          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.934e-23
Identity = 67/154 (43.51%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K F+L EL  AT+NFS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L    E    L W  R  IALG A GL YLH+ C ++IIHR   AANILL E+F
Sbjct:  280 KRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEF 433          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.934e-23
Identity = 59/160 (36.88%), Postives = 99/160 (61.88%), Query Frame = 1
Query:  379 YDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            Y+ + P   F+L +++ AT++F+  N IG+GG+  V+KG L +G++VA+K+L+   + +   +FL+E+G ++ + HPN  KL G+ +E   + +  E   N SL+S L+  K K   + W  R+KI  G+A+GL +LHE    + +HR   A NILL +D
Sbjct:  660 YEEELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLS-SKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKD 818          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.934e-23
Identity = 61/152 (40.13%), Postives = 91/152 (59.87%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMK--------EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            EL+  T+NF  + LIG+G Y  VY G L++G+  AIK+L      +   +FL+++ +++ +   N  +LLGY ++GG  ++  E +PNGSL  +L+G K          L W  R KIA+G A+GL YLHE  Q  IIHR   ++NILL +D
Sbjct:   60 ELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPD--REFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDD 209          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.934e-23
Identity = 61/150 (40.67%), Postives = 93/150 (62.00%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            F L  ++SAT+NFS  N +GKGG+ EVYKG L NG  +A+KRL++ T+ +   +F +E+ ++A + H N  +LLG+ ++G    +V E   N SL   L+    + +L W +R  I  G+  G+LYLH+  + +IIHR   A+NILL  D
Sbjct:  327 FDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSK-TSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFDPTKRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDAD 475          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.749e-23
Identity = 62/150 (41.33%), Postives = 92/150 (61.33%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMK---EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            ++L EL++ATN    EN+IG+GGY  VY+G L +G  VA+K L   RG A++   +F  E+ ++  V H N  +LLGY +EG    +V +   NG+L   ++G       L W IR  I LG+A+GL YLHEG + +++HR   ++NILL
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEK---EFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILL 288          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22
Identity = 69/175 (39.43%), Postives = 99/175 (56.57%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQ------KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            P ++F +    + P+      K FSL ELQ A++ FS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L      +  L W  R +IALG A GL YLH+ C  +IIHR   AANILL E+F
Sbjct:  267 PLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEF 441          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.322e-22
Identity = 62/145 (42.76%), Postives = 92/145 (63.45%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            +Q+ATN+FS  N IG+GG+ +VYKG   NG  VA+KRL++ T+++   +F +E+ ++A++ H N  ++LG+ IE    I V E   N SL + L+    K +L W  RY I  G+A G+LYLH+  +  IIHR   A+NILL  D
Sbjct:  329 IQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSK-TSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDAD 472          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
CRK17_ARATH2.663e-2335.45Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK29_ARATH3.479e-2341.38Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK23_ARATH3.479e-2337.07Putative cysteine-rich receptor-like protein kinas... [more]
SERK4_ARATH5.934e-2343.51Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RKF1_ARATH5.934e-2336.88Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC5.934e-2340.13Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
CRK18_ARATH5.934e-2340.67Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y1154_ARATH7.749e-2341.33Probable serine/threonine-protein kinase At1g01540... [more]
SERK1_ARATH1.012e-2239.43Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK7_ARATH1.322e-2242.76Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
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