FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22
Identity = 60/147 (40.82%), Postives = 91/147 (61.90%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            + L  +++AT  FS  N++G+GG+ EV+KG L++G  +A+KRL++ +A  +  +F +E  ++A + H N   +LG+ +EG   I V E  PN SL   L+   +K  L W  RYKI +G A G+LYLH     +IIHR   A+NILL
Sbjct:  309 YDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGV-QEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILL 454          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22
Identity = 62/150 (41.33%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            F    +++AT NF   N +G GG+ EVYKG   NG  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLGY ++G   I V E  PN SL   L+    K +L W  RY I  G+  G++YLH+  +  IIHR   A NILL  D
Sbjct:  300 FEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSK-TSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDAD 448          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22
Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            L +N    + P +  +   L  ATN FS +++IG GG+ +VYK +L +G +VAIK+L + T  +   +F++E+  +  + H N   LLGY   G    +V E    GSL ++L+   +K    L W  R KIA+G A GL +LH  C   IIHR   ++N+LL +DF
Sbjct:  832 LSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTG-QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDF 997          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21
Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 1
Query:  358 RNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTE 843
            RNL + S    + +  F    L+ AT+ FS + ++G+GG   V+ G L NG+ VA+KRL   T D  + +F +E+ +++ + H N  KLLG  IEG    +V E  PN SL   L+     + L W  R  I LG AEGL YLH G   RIIHR    +N+LL +
Sbjct:  287 RNLGLVSRKFNNSKTKFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRD-WVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDD 450          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.119e-21
Identity = 71/191 (37.17%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  289 VTLYPLKLSIRRSSSMR-EGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTE 843
            V LY      RR++  R EG D+   +     D+Q  Q  F    L  ATN+FS +N +G+GG+  VYKG L  G+ +A+KRL+   G  D    +F++E+ ++A + H N  +LLG+ ++G   I++ E   N SL   ++    +  L W  RY+I  GVA GLLYLHE  + +I+HR   A+N+LL +
Sbjct:  297 VFLYFFMTRNRRTAKQRHEGKDLEELMIK---DAQLLQLDFDTIRL--ATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDN---EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDD 479          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGT-ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            + S+  L+S TNNFS +N++G GG+  VYKG L +G  +A+KR+  G  A +  A+F SE+ ++  V H +   LLGY ++G    +V E  P G+L+  L+   E+    L W  R  +AL VA G+ YLH    +  IHR    +NILL +D
Sbjct:  575 LISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 728          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            QS  K  S  +L  +TN+F   N+IG GG+  VYK  L +G+ VAIK+L+ G   +I  +F +E+  ++   HPN   L G+   +    ++     NGSL   L+   +    LKW  R +IA G A+GLLYLHEGC   I+HR   ++NILL E+F
Sbjct:  716 QSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLS-GDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENF 872          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 60/152 (39.47%), Postives = 86/152 (56.58%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD-FLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            +++  LQ ATN+FS EN+IG+G    VY+    NG+++AIK++          D FL  +  M+ + HPN   L GY  E G  + V E   NG+L   L+   ++   L W  R K+ALG A+ L YLHE C   I+HR + +ANILL E+
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEE 534          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            F    +++ATN F   N +G+GG+ EVYKG   +G  VA+KRL++ T+ +   +F +E+ ++A + H N  +LLG+ +E    I V E  PN SL   ++   M+  L W  RYKI  G+A G+LYLH+  +  IIHR   A NILL +D
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSK-TSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDD 487          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.493e-21
Identity = 63/152 (41.45%), Postives = 91/152 (59.87%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLA-SLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K F+  EL  AT+NF+    IG+GGY +VYKG L +G +VAIKR   G+  +   +FL+E+ +++ + H N   LLG+   EG   +V E   NG+L  ++   +KE L + +R +IALG A+G+LYLH      I HR   A+NILL   F
Sbjct:  611 KSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSL-QGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRF 761          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
CRK33_ARATH8.568e-2240.82Putative cysteine-rich receptor-like protein kinas... [more]
CRK24_ARATH8.568e-2241.33Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
BRL3_ARATH8.568e-2237.13Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
CRK42_ARATH1.119e-2139.39Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK41_ARATH1.119e-2137.17Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
TMK1_ARATH1.461e-2138.96Probable receptor protein kinase TMK1 OS=Arabidops... [more]
PSKR1_ARATH1.461e-2139.87Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
SRF8_ARATH1.909e-2139.47Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK4_ARATH1.909e-2140.67Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
Y1684_ARATH2.493e-2141.45Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
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