FC929615

Overview
NameFC929615
Unique NameFC929615
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K  S+ EL  +TNNFS  N+IG GG+  VYK    +G   A+KRL+ G   ++  +F +E+  ++  +H N   L GY   G   +++     NGSL   L+   +    L W +R KIA G A GL YLH+ C+  +IHR   ++NILL E F
Sbjct:  740 KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLS-GDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKF 892          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 62/162 (38.27%), Postives = 96/162 (59.26%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            K F+  EL++AT NF  +NL+G+GG+  V+KG          R  +G +VA+K+L +    +   ++L+E+  +  + HPN   L+GY  EG    +V E  P GSL + L+    + L W IR K+A+G A+GL +LHE  + ++I+R + AANILL  DF
Sbjct:   72 KAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQL-KPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADF 231          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 57/151 (37.75%), Postives = 87/151 (57.62%), Query Frame = 1
Query:  409 SLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            SL ++  +T++F+  N+IG GG+  VYK  L +G  VAIKRL+ G   ++  +F +E+  ++   HPN   LLGY   +    ++     NGSL   L+   +    L W  R +IA G AEGL YLH+ C+  I+HR   ++NILL++ F
Sbjct:  732 SLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLS-GDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTF 881          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 65/166 (39.16%), Postives = 87/166 (52.41%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            L +N    + P     L ++  AT++FS +N+IG GG+  VYK  L   + VA+K+L+         +F++E+  +  V HPN   LLGY        +V E   NGSL   L    GM E L W  R KIA+G A GL +LH G    IIHR   A+NILL  DF
Sbjct:  891 LSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGN-REFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDF 1055          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 62/154 (40.26%), Postives = 92/154 (59.74%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD-FLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTED 846
            +IFS  E++SAT NF  + +IG+G +  VY+G+L +G+ VA+K   R    ++ AD F++E+ +++ + H N     G+  E    I V E    GSLA  LYG + K   L W  R K+A+  A+GL YLH G + RIIHR   ++NILL +D
Sbjct:  594 RIFSHKEIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVK--VRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKD 743          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 55/153 (35.95%), Postives = 92/153 (60.13%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGM-HIVLELSPNGSLASLLYGMKEKL--KWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            +IFS  EL+ AT+NFS   ++G+GG   VYKG L +G+ VA+K+ ++   ++ + +F++E+ I++ ++H +  KLLG  +E  +  +V E  PNG+L   ++   +     WG+R +IA+ +A  L YLH      I HR   + NILL E +
Sbjct:  437 RIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKK-SKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKY 588          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 56/153 (36.60%), Postives = 90/153 (58.82%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            KIFS  EL+ AT+NFS + ++G+GG   VYK  L +G +VA+KR ++   ++ + +F++E+ +++ ++H N  KLLG  +E  + I V E  PNG L   L+   +   + W +R +IA+ +A  L Y+H      I HR     NILL E +
Sbjct:  414 KIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKR-SKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKY 565          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILL 837
            F    +++AT+NF   N +G GG+  VYKG   NG  VA KRL++  +D+   +F +E+ ++A + H N   LLG+ +EG   I V E  PN SL   L+    + +L W  R+ I  G+  G+LYLH+  +  IIHR   A+NILL
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSK-PSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILL 496          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 75/232 (32.33%), Postives = 111/232 (47.84%), Query Frame = 1
Query:  199 PCSETKPESKSNSRWHLFYDLFRNKSKKSLVTLYPLKLSIRRSSSMREGIDM---PRNLFVNSYDSQSPQKI----------FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            P S      K N  W +   +       SL  L  L L  R+++  R        P   F  S +S++ ++            S  ELQS TNNF    +IG GG+  V++G L++   VA+KR + G+  + + +FLSE+ I++ + H +   L+GY  E   M +V E    G L S LYG     L W  R ++ +G A GL YLH G  + IIHR   + NILL  ++
Sbjct:  395 PVSSEVVSGKRNVVWIVVGSVLGGFVFLSLFFLSVLCLCRRKNNKTRSSESTGWTPLRRFRGSSNSRTTERTVSSSGYHTLRISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSR-QGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNY 625          
BLAST of FC929615 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRRY*AANILLTEDF 849
            ++ ATNNF     IG GG+ +VYKG L +G  VA+KR     + + +A+F +E+ +++   H +   L+GY  E   M ++ E   NG++ S LYG     L W  R +I +G A GL YLH G  + +IHR   +ANILL E+F
Sbjct:  478 VKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKR-GNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENF 621          
The following BLAST results are available for this feature:
BLAST of FC929615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
PSKR2_ARATH6.140e-2038.31Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
APK2A_ARATH6.140e-2038.27Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
PSKR1_DAUCA1.047e-1937.75Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
EXS_ARATH1.047e-1939.16Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5487_ARATH1.368e-1940.26Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH1.368e-1935.95Putative wall-associated receptor kinase-like 11 O... [more]
WAKLC_ARATH1.368e-1936.60Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
CRK21_ARATH1.368e-1939.46Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
Y5241_ARATH1.787e-1932.33Probable receptor-like protein kinase At5g24010 OS... [more]
HERK_ARATH1.787e-1939.31Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929615 ID=FC929615; Name=FC929615; organism=Citrus clementina; type=EST; length=850bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGGAGATATTAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
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