FC929858

Overview
NameFC929858
Unique NameFC929858
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16
Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  206 LTGHQSAVYTMKVN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700
            L GH++ VY +  N P G  +A+GS D+   LW    G C  F   +GH   I+ L +    + + + S D T + WDVE+G+++  +A H + + S C +  G  L V+GS D TA LWD+     +      + +I+ V F+     I T  +D   KVWD   G+
Sbjct:  130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKC--FYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRL-VTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQ 294          

HSP 2 Score: 77.0258 bits (188), Expect = 1.093e-13
Identity = 46/170 (27.06%), Postives = 78/170 (45.88%), Query Frame = 2
Query:  206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLRKGESKH 709
            L  H   +  +  N +G+   +GS+DR   +W      +    L+GH+N +  + +    G ++ + S DKT + W  ETGK       H + +  C        LV +GS D TAKLWD+     + T    + +I ++ F+   + + TG  D+   +WD+  G   H
Sbjct:   88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDT-ASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEI-VCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH 255          

HSP 3 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = 2
Query:  197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAI-QTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697
            +  L GH + + ++  N  G  + +GS D    LW V    K   VL GH+  I  + +  D S I +AS DK+ + WD E G+ +  +  HN  V   C +  G  L+ + S DGT++++       + Q    K +I+ V F+     + T  +D   +VW ++ G
Sbjct:  212 VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRK-VHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTG-QLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG 377          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: UTP15_DANRE (U3 small nucleolar RNA-associated protein 15 homolog OS=Danio rerio GN=utp15 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.240e-16
Identity = 50/171 (29.24%), Postives = 83/171 (48.54%), Query Frame = 2
Query:  188 ESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAV-SFSDASE*IYTGGIDNDVKVWDLRKG 697
            + PI   T      Y       G ++ +GS +  I L+ + G   +    KGH  A+    + +DG +++S S D T R WDV +  ++  + EH  ++ +  PS+  P + V+GS D T K++D+R   ++ T      +  V  +   +  + TGG    VKVWDL KG
Sbjct:   70 QEPIRNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRV-SLRQFKGHSKAVHATSFLSDGFRVLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHTVKMFDVRSGNSVMTMQHGQPVECVLLYPSEALLVSTGG--RYVKVWDLLKG 237          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: Y163_SYNY3 (Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis sp. (strain PCC 6803) GN=sll0163 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 2
Query:  185 LESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMR 568
            L  P++ L GHQS VY  + +P G +IA+ S D    LW   G  K   VL GH+  +  + W+ DG  +++AS D T R WD+ +G+++  +  H ++V S   S  G   V++ S DGTAKLW ++
Sbjct: 1536 LGRPLLTLAGHQSIVYQARFSPEGNLIATVSADHTARLWDRSG--KTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDL-SGRELLTLEGHGNWVRSAEFSPDG-RWVLTSSADGTAKLWPVK 1659          

HSP 2 Score: 82.8037 bits (203), Expect = 1.991e-15
Identity = 50/163 (30.67%), Postives = 85/163 (52.15%), Query Frame = 2
Query:  197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWD 685
            + +L  HQ  V   + +P G  I +GS D+   LW+V G  K   VL+GH++A+L++ ++ D   I++AS D T R W+  TG+++  +  +   + +   S  G   +V+ SDD TA +W++  R        +  +    FS  S  I T  +DN  ++WD
Sbjct: 1376 VAVLADHQGWVREGQFSPDGQWIVTGSADKTAQLWNVLG--KKLTVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWN-NTGRELAVLRHYEKNIFAAEFSADG-QFIVTASDDNTAGIWEIVGREVGICRGHEGPVYFAQFSADSRYILTASVDNTARIWD 1534          

HSP 3 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 56/184 (30.43%), Postives = 86/184 (46.74%), Query Frame = 2
Query:  161 NGKQRTSSLES-PIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDASE*IYTGGIDNDVKVWDLRKGES 703
            +G  R   LE   I L  GH S V   + +P G  I + S D    LW +   C  F VLKGH+N + +  W+ DG  II++S D T R W    GK +  +  H+  ++    S  G   +V+ S D TA+LW   + G + T    +Q  +    FS     ++T   D   + WD+ + ++
Sbjct: 1158 DGTARLWDLEGREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQC--FAVLKGHQNWVNNALWSPDGQHIITSSSDGTARVWS-RHGKCLGTLRGHDHNIHGARFSLDGQK-IVTYSTDNTARLW--TKEGTLLTILRGHQKEVYDADFSADGRFVFTVSADQTARQWDISQKDT 1335          

HSP 4 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 44/164 (26.83%), Postives = 78/164 (47.56%), Query Frame = 2
Query:  197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDL 688
            I +L GHQ A+  +  +  G   A+ S D  + LW  HG+      L+GH++ +  +H++     ++++  D T R W+   G+Q+     H  +V +   +  G  ++++ S DGTA+LWD+  R           +    FS   + I T   D   ++WDL
Sbjct: 1048 INVLRGHQEAITALDWSADGQYFATASADHTVKLWQRHGE--EVATLRGHEDWVRSVHFSPHHQFLVTSGQDNTARIWNF-AGEQLTLCQGHADWVRNAEFNCHG-QILLTASRDGTARLWDLEGREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDL 1207          

HSP 5 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 46/163 (28.22%), Postives = 79/163 (48.47%), Query Frame = 2
Query:  197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWD 685
            + +L GHQ  VY    +  G  + + S D+    W +    K+ + L GH + + + H+   G ++++ S DKT R W  E G+ +  +A+H  +V     S  G   +V+GS D TA+LW++  +        +  +  V FS  S+ I T   D   +VW+
Sbjct: 1294 LTILRGHQKEVYDADFSADGRFVFTVSADQTARQWDISQ--KDTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARLWTTE-GECVAVLADHQGWVREGQFSPDG-QWIVTGSADKTAQLWNVLGKKLTVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWN 1452          

HSP 6 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 42/160 (26.25%), Postives = 74/160 (46.25%), Query Frame = 2
Query:  212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691
            GH+  VY  + +     I + S D    +W   G  +  + L GH++ +    ++ +G+ I + S D T R WD  +GK +  +  H   V +   S  G  ++V+ S+DGTA+LWD+  R  +        + +  FS     + T   D   K+W ++
Sbjct: 1504 GHEGPVYFAQFSADSRYILTASVDNTARIWDFLG--RPLLTLAGHQSIVYQARFSPEGNLIATVSADHTARLWD-RSGKTVAVLYGHQGLVGTVDWSPDGQ-MLVTASNDGTARLWDLSGRELLTLEGHGNWVRSAEFSPDGRWVLTSSADGTAKLWPVK 1659          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1B_DANRE (Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 52/187 (27.81%), Postives = 94/187 (50.27%), Query Frame = 2
Query:  197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTD--------------------GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691
            +   TGH+  V  ++ N  GT++AS S+D+ + +W V   +CK    L+ H++ +  + W  +                    G  ++S S DKT++ WD+ TG  +  +  H+++V        G   VVS +DD T ++WD + +  ++T    ++ +T++ F  AS  + TG +D  VKVW+ R
Sbjct:  227 VKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECK--AELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVL-FHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410          

HSP 2 Score: 68.1662 bits (165), Expect = 5.076e-11
Identity = 52/187 (27.81%), Postives = 86/187 (45.99%), Query Frame = 2
Query:  206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---------DMRQR----GAIQTFPDKYQITAVSFSDASE---------*IYTGGIDNDVKVWDLRKG 697
            L GH  +V  +  +  G ++AS S D  I LW   G +C     + GH + +  +    +G  I+SAS DKT++ W+V TG  +K    H  +V    P++ G  L+ S S+D T ++W         ++R+       I   P+    T +S +  SE          + +G  D  +K+WD+  G
Sbjct:  146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFEC--IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDG-TLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPT-ISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTG 328          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: FBXW7_HUMAN (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 53/169 (31.36%), Postives = 86/169 (50.89%), Query Frame = 2
Query:  203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700
            +L GH +AV  ++ +  G  + SG++D  + +W    + C +   L+GH N +  L +  DG  ++S S D ++R WDVETG  I  +  H S  +          ++VSG+ D T K+WD++    +QT   P+K+Q            + T   D  VK+WDL+ GE
Sbjct:  496 VLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLH--TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 655          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: FBXW7_MOUSE (F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 2
Query:  203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGD-CKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700
            +L GH +AV  ++ +  G  + SG++D  + +W    + C +   L+GH N +  L +  DG  ++S S D ++R WDVETG  I  +  H S  +          ++VSG+ D T K+WD++    +QT   P K+Q            + T   D  VK+WDL+ GE
Sbjct:  418 VLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLH--TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG---MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 577          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 53/173 (30.64%), Postives = 89/173 (51.45%), Query Frame = 2
Query:  191 SPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700
            S + +L GH +AV  ++ +  G +I SG++D  + +WH    +C +   L+GH N +  L +  DG  ++S S D ++R WDVETG     +  H S  +     +    ++VSG+ D T K+WD+     +QT   P+K+          S  + T   D  VK+WD++ G+
Sbjct: 1106 SCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLH--TLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN---ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGD 1269          

HSP 2 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 51/170 (30.00%), Postives = 88/170 (51.76%), Query Frame = 2
Query:  206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESKH 709
            L GH   V++ +++  G +I SGS DR + +W +  G C +   L+GH + +  +H    GS+++S S D TLR WD+E G  +  +  H + V   C    G  L+VSG+ D   K+W   ++  + T      ++ ++ F      + +G +D  ++VWD+  G  KH
Sbjct: 1031 LVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVH--TLQGHTSTVRCMH--LHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVR--CVQYDG-KLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDVETGNCKH 1189          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 58/177 (32.77%), Postives = 92/177 (51.98%), Query Frame = 2
Query:  161 NGKQRTSSLESPIMLLT--GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQIT-AVSFSDASE*IYTGGIDNDVKVW 682
            +G  R   LE+  +L T  GH++++ ++  +P G  +ASGS D +I LW V      F   KGH  A+  L ++ DG  + SAS D T++ WD+  GK I +   H S VN          L+ SGS D T KLWD+ +   I +   +  +  +V F+     +Y+G  +N ++V+
Sbjct:   84 SGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRY-KGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVN-VVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257          

HSP 2 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 54/167 (32.34%), Postives = 73/167 (43.71%), Query Frame = 2
Query:  197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRK 694
            IM LTGH SAV  ++ N +   + +GS    + LW +    K    L GHK +I  L +   G  + S S D  ++ WDV     + +   H   V     S  G  L  S SDD T KLWD+     I  F      +  V F      + +G  D  VK+WDL K
Sbjct:   56 IMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA-AKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWL-ASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEK 220          

HSP 3 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 46/168 (27.38%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  206 LTGHQSAVYTMKVNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700
            +  H S V ++ +  + G ++A+G  D  + +W V   +C   M L GH +A+  + + +   ++++ S   +LR WD+E  K ++ +  H + ++S      G  L  SGS D   KLWD+R++G +  +    Q +  ++FS   + + +   D+ VK+WDL  G+
Sbjct:   16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNC--IMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL-ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK 180          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: YH92_CAEEL (Uncharacterized WD repeat-containing protein ZC302.2 OS=Caenorhabditis elegans GN=ZC302.2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 53/194 (27.32%), Postives = 90/194 (46.39%), Query Frame = 2
Query:  131 PYSAPQAPGPNGKQRTSSLE----SPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697
            P   P AP  +    T   E    S +  ++GH  +V  +K +  G  + +GS D+ I +W+   D      L  H+  I D  W+++   I SAS D T++ +DV +G  ++ M  H ++V  CC       L+ S   D T ++WD +    ++  P     IT++S++     + T   D  ++VWD   G
Sbjct:  180 PPRDPVAPTTSSSGITKKPENGEFSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTV-DMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYV-FCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASG 371          
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15
Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 2
Query:  212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLK---GHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNS--CCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706
            GH   V+ +  +P G   A+ SHD+   LW     C +   L+   GH N +  + +  +G  + + S DKT R WDV TG  ++    H + V S   CP  R    + +GS+DG   +WD+     ++      K  I ++S+S     + +GG D+ V+VWDL+K  ++
Sbjct:  565 GHNHPVWDVSFSPLGHYFATASHDQTARLW----SCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGR---WLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTE 729          
The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
WDR69_DANRE1.379e-1632.74WD repeat-containing protein 69 OS=Danio rerio GN=... [more]
UTP15_DANRE5.240e-1629.24U3 small nucleolar RNA-associated protein 15 homol... [more]
Y163_SYNY36.844e-1637.50Uncharacterized WD repeat-containing protein sll01... [more]
LIS1B_DANRE6.844e-1627.81Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1... [more]
FBXW7_HUMAN6.844e-1631.36F-box/WD repeat-containing protein 7 OS=Homo sapie... [more]
FBXW7_MOUSE8.938e-1631.36F-box/WD repeat-containing protein 7 OS=Mus muscul... [more]
FBXW7_DROME8.938e-1630.64F-box/WD repeat-containing protein 7 OS=Drosophila... [more]
KTNB1_DANRE1.167e-1532.77Katanin p80 WD40-containing subunit B1 OS=Danio re... [more]
YH92_CAEEL1.525e-1527.32Uncharacterized WD repeat-containing protein ZC302... [more]
TAF5_YEAST1.991e-1530.23Transcription initiation factor TFIID subunit 5 OS... [more]

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Properties
Property NameValue
Genbank descriptionC34001B10EF PostHarvC1 Citrus clementina cDNA clone C34001B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bp
AACAAGAAGAAATCGAGCTCATTTGTCCAGCATAGTACCAGAGGGAAATA
TGGAAGTTGTTACACACCAAAGAGAGAATGAAAATGCTTTGTCTACTGTT
AGTGCAAGGCCAATGGAATGGTCTACAGTCCCATATAGTGCTCCCCAAGC
TCCAGGTCCAAATGGAAAGCAGAGAACATCAAGTTTAGAATCACCGATTA
TGTTGCTGACAGGCCATCAGAGTGCTGTATATACCATGAAGGTCAATCCA
GCAGGAACGGTGATTGCTTCTGGATCTCACGACAGAGACATCTTCCTTTG
GCATGTGCATGGGGATTGCAAAAATTTCATGGTTCTGAAGGGGCATAAGA
ATGCAATTCTGGATCTTCACTGGACAACTGACGGGTCCCAGATAATATCA
GCCAGCCCGGACAAAACTCTGCGGGCCTGGGATGTTGAAACCGGAAAACA
GATTAAAAAGATGGCAGAGCACAACTCTTTTGTCAATTCTTGCTGCCCTT
CTCGGAGAGGACCGCCTCTTGTTGTTAGTGGCTCTGATGATGGAACTGCT
AAACTTTGGGATATGCGTCAGAGGGGTGCTATCCAAACATTTCCAGATAA
ATACCAGATCACAGCTGTCAGTTTCTCCGATGCTTCTGAATAAATCTACA
CTGGTGGCATAGACAATGACGTCAAGGTTTGGGACTTGCGTAAAGGTGAA
AGTAAGCAT
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