FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: MORG1_XENTR (Mitogen-activated protein kinase organizer 1 OS=Xenopus tropicalis GN=morg1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 149 APGPNGKQRTSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR--GAIQTFPD-KYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 AP P + L+ L +Q AV ++ N G + D+ + LW+ H GH +LD + D SQ+ S S DKT+ WDV G+ ++K H VN C +++SGS D + + WD R R AIQ + K I+++ SD I G +D +++ +DLRKGE Sbjct: 5 APKPKAPELPQKLQHK---LECNQGAVRAVRFNVDGNYCMTCGSDKTLKLWNPHKGTL-LKTYSGHGYEVLDTAGSYDNSQMCSCSSDKTVILWDVAQGQVVRKFRGHAGKVN-CVQFNEEATVIMSGSIDSSIRCWDCRSRRPEAIQILDEAKDGISSIKISDHE--ILAGSVDGNLRRYDLRKGE 184
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 51/183 (27.87%), Postives = 93/183 (50.82%), Query Frame = 2 Query: 209 TGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTD--------------------GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691 TGH+ V ++V+ G++ A+ S+D+ I +W + DCK + L+ H++ + + W + G + S S DKT+R WDV G + ++ H+++V G +VS SDD T ++WD+R + ++T + ++ T++ F A + +G +D VKVW+ R Sbjct: 232 TGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCK--VELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLA-FHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 58/175 (33.14%), Postives = 88/175 (50.29%), Query Frame = 2 Query: 149 APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-TFPDKYQITAVSFSDASE*IYTGGID 664 A +G R LE+ +L T GH++ V ++ +P G +ASGS D +I LW V F KGH A+ L ++ DG + SAS D +++ WD+ GK + +++EH VN L+ SGS D T + WD+ + I T + + A+ FS I+ GG D Sbjct: 80 AGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRY-KGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVN-IIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGRD 252 HSP 2 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 48/168 (28.57%), Postives = 84/168 (50.00%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPA-GTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 + H S+V ++ + + G ++A+G D + LW V+ +C M L GH + + + I++ S +LR WD+E K ++ + H + V S G V SGS D KLWD+R++G + + Q + + FS + + + D+ VK+WDL G+ Sbjct: 16 IVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNC--IMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYG-DFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGK 180
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.991e-15 Identity = 57/176 (32.39%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 149 APGPNGKQRTSSLESPIMLLT--GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQ-TFPDKYQITAVSFSDASE*IYTGGIDN 667 A +G R LE+ +L T GH++ V ++ +P G +ASGS D +I LW V F KGH A+ L ++ DG + SAS D +++ WD+ GK + +++EH VN L+ SGS D T + WD+ + + T + + A+ FS+ I+ GG D+ Sbjct: 80 AGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRY-KGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVN-IIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDS 253 HSP 2 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 45/152 (29.61%), Postives = 77/152 (50.66%), Query Frame = 2 Query: 251 AGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 +G ++A+G D + LW V+ +C M L GH + + + I++ S +LR WD+E K ++ + H + V+S G V SGS D KLWD+R++G + + Q + + FS + + + D+ VK+WDL G+ Sbjct: 32 SGRLVATGGDDCRVHLWSVNKPNC--IMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYG-EFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGK 180
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP19_HUMAN (Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 50/174 (28.74%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 182 SLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV-SGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLRK 694 S E + L GH V ++ +P+ ++ S S D I +W V + C V++ H++A+ L G ++S+S D+ D++TG+ + K+ + S + C L+ +G+ D K+WD+++R + FP IT+++FS+ + T D+ VK+WDLRK Sbjct: 252 SSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC--VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 50/174 (28.74%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 182 SLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV-SGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLRK 694 S E + L GH V ++ +P+ ++ S S D I +W V + C V++ H++A+ L G ++S+S D+ D++TG+ + K+ + S + C L+ +G+ D K+WD+++R + FP IT+++FS+ + T D+ VK+WDLRK Sbjct: 252 SSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASC--VQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NUDF_CRYNE (Nuclear distribution protein PAC1 OS=Cryptococcus neoformans GN=PAC1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 56/191 (29.32%), Postives = 86/191 (45.03%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD-------MRQRG-----------AIQTFPDKYQITAV------SFSDASE*IY--TGGIDNDVKVWDLRKGE 700 L GH AV + +P G ++A+ S D + LW N L GH +++ + + DG ++SAS DKT+R W V +G IK + H +V PS G L VS S+D T+++WD M RG + +P ++ + S +Y TG D +K+WD G+ Sbjct: 143 LKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGRWL-VSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPVNAYPAIRELAGLKPPAPRDTRAKSPGVYAATGSRDKTIKLWDALSGQ 332 HSP 2 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 55/201 (27.36%), Postives = 87/201 (43.28%), Query Frame = 2 Query: 176 TSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVN-------SCCPSRR-----GPP------------LVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 T++ + + L GH +V +++ P G + S S D+ I +W V G C GH + + + DG ++SAS D+T R WD TG+ ++ H V + P+ R PP +GS D T KLWD ++T D + I A+ F + + + + D +KVWDL G Sbjct: 176 TANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYC--IKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPVNAYPAIRELAGLKPPAPRDTRAKSPGVYAATGSRDKTIKLWDALSGQCLRTLVGHDNW-IRALVFHPSGKYLLSASDDKTIKVWDLANG 373
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: MORG1_XENLA (Mitogen-activated protein kinase organizer 1 OS=Xenopus laevis GN=morg1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 149 APGPNGKQRTSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR--GAIQTFPD-KYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 AP P + L+ L +Q AV ++ N G + D+ + LW+ H GH +LD + D SQ+ S S DKT+ WDV G+ ++K H VN C +++SGS D + + WD R R AIQ + K I++V S + I G +D +++ +DLRKGE Sbjct: 5 APKPKAPELPQKLQHK---LECNQGAVRAVRFNVDGNYCMTCGSDKSLKLWNPHKGSL-LKTYSGHGYEVLDTAGSCDNSQLCSCSSDKTVILWDVAQGQVVRKFRGHAGKVN-CVQFNEEATVIISGSIDSSIRCWDCRSRRPDAIQIMDEAKDGISSVKVS--AHEILAGSVDGNLRRYDLRKGE 184
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 53/172 (30.81%), Postives = 83/172 (48.26%), Query Frame = 2 Query: 179 SSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA-VSF--SDASE*IYTGGIDNDVKVWD 685 +S +P++ L GH + V + +P+G + S S D LW VH + ++ +GH I + DGS + S D R WD+ +GK I + EH + + S G L S +DD T K+WD+R+ T P + + V + S + I T G D VK+W+ Sbjct: 252 ASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVE-LLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADD-TVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421 HSP 2 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 46/150 (30.67%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 263 IASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLRKGESKH 709 +A+G+ D + LW + L+GH + + + G ++SAS D T R WDV TG ++ H+ + S G LV SG +D ++WD+R +I + QI A+++S + T D+ VK+WDLRK H Sbjct: 238 LATGAADNTVCLWKA-SQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS-LVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAH 385
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP19_RAT (Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 49/173 (28.32%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 182 SLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV-SGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLRK 694 S E + L GH V ++ +P+ ++ S S D I +W V + V++ H++A+ L G ++S+S D+ D++TG+ + K+ + S + C L+ +G+ D K+WD+++R + FP IT+++FS+ + T D+ VK+WDLRK Sbjct: 252 STEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP-NTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |