FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP46_ASPFU (Pre-mRNA-splicing factor prp46 OS=Aspergillus fumigatus GN=prp46 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 59/195 (30.26%), Postives = 92/195 (47.18%), Query Frame = 2 Query: 131 PYSAPQAPGPNGKQRTSSLESP---IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGES 703 P S Q P +QR P + +++GH V ++ V P ASG+ DR I +W++ + L GH + + L + + S DK ++ WD+ET K I+ H S V + R L+V+G DG A++WDMR R I K + + +A I TG +D V++WDL G++ Sbjct: 113 PKSLIQRPSATRQQRPD-WHPPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALR-LTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPR-LDLLVTGGRDGVARVWDMRTRSNIHVLSGHKGTVADLKCQEADPQIITGSLDATVRLWDLAAGKT 304 HSP 2 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 42/162 (25.93%), Postives = 70/162 (43.21%), Query Frame = 2 Query: 212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 GH S VYT+ ++P ++ +G D +W + N VL GHK + DL QII+ S D T+R WD+ GK + + H V + R + + G+ K W + +Q F + + +++GG + + WD + G Sbjct: 226 GHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTR-SNIHVLSGHKGTVADLKCQEADPQIITGSLDATVRLWDLAAGKTMGVLTHHKKGVRNLAIHPR--EFTFASASTGSIKQWKCPEGDFMQNFEGHNAVINSLAVNEDNVLFSGGDNGSMCFWDWKTG 384
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP46_EMENI (Pre-mRNA-splicing factor prp46 OS=Emericella nidulans GN=prp46 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 58/195 (29.74%), Postives = 92/195 (47.18%), Query Frame = 2 Query: 131 PYSAPQAPGPNGKQRTSSLESP---IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITA-VSFSDASE*IYTGGIDNDVKVWDLRKGES 703 P S Q P +Q+ +P + +++GH V ++ V P ASG+ DR I +W++ + L GH + + L + + S DK ++ WD+ET K I+ H S V + R L+V+G DG A++WDMR R I A V +A + TG +D V++WDL G++ Sbjct: 112 PTSLIQRPSAT-RQQPPEWHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALR-LTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPR-LDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKT 303
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1_PANTR (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan troglodytes GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 50/187 (26.74%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQ--------------------IISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691 + TGH+ V ++ N GT+IAS S+D+ + +W V +CK L+ H++ + + W + S ++S S DKT++ WDV TG + + H+++V G ++S +DD T ++WD + + ++T ++ +T++ F + + TG +D VKVW+ R Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGFVDQTVKVWECR 410 HSP 2 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 49/186 (26.34%), Postives = 90/186 (48.39%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW---------DMRQRGAIQ---TFPDKYQITAVSFSDASE---------*IYTGGIDNDVKVWDLRKG 697 L GH +V + + +G ++AS S D I LW G +C + GH + + + +G I+SAS DKT++ W+V+TG +K H +V P++ G L+ S S+D T ++W ++R+ + ++ + +++S + SE + +G D +K+WD+ G Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L GH V+T +++ G I SGS DR + +W D L+GH + + + GS +++ S D TLR WDVE+G+ + + H++ V C G VVSG D T K+W+ I+T ++ ++ F + +G +D ++VWD + E + Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV-DGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR--CVQFDG-TTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ 453
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP19_CHICK (Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 49/174 (28.16%), Postives = 89/174 (51.15%), Query Frame = 2 Query: 182 SLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVV-SGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDASE*IYTGGIDNDVKVWDLRK 694 S E + L GH V ++ +P+ ++ S S D I +W V + C V++ H+ ++ L G ++S+S D+ D++TG+ + K+ + +S C L+ +G+ D K+WD+++R + FP IT+++FS+ + T D+ VK+WDLRK Sbjct: 253 SSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC--VQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRK 424
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 50/187 (26.74%), Postives = 91/187 (48.66%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHV-HGDCKNFMVLKGHKNAILDLHWTTD--------------------GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691 + TGH+ V ++ N GT+IAS S+D+ + +W V +CK L+ H++ + + W + G ++S S DKT++ WDV G + + H+++V G +VS +DD T ++WD + + +T ++ +T++ F + + TG +D VKVW+ R Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECK--AELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVL-VHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHG-DCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLW 559 L GH +V + + G ++AS S D I LW G +C + GH + + + +G I+SAS DKT++ W+V TG +K H +V P++ G L+ S S+D T ++W Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFEC--IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDG-TLIASSSNDQTVRVW 261
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: MORG1_DANRE (Mitogen-activated protein kinase organizer 1 OS=Danio rerio GN=morg1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 61/193 (31.61%), Postives = 87/193 (45.08%), Query Frame = 2 Query: 131 PYSAPQAPG-PNGKQRTSSLESPIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR--GAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 P PQAP P RT + Q AV ++ N G + + D+ + LW V GH +LD + D SQ+ S S DKT+ WDV +G+ +K+ H VN C +++SGS DGT + WD R R IQ D+ Q S + + TG +D V+ +DLR G+ Sbjct: 4 PQPRPQAPQLPQHLWRTVDCQ---------QGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTL-LKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVN-CVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQIL-DESQDGISSLKVSEHELLTGSVDGRVRRYDLRMGQ 184
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 45/169 (26.63%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 + LTGH + + ++ N +G I +GS D + +W K + ++ GH I + D S I++ S DKT + WD GK + + H+ + C G L+ + S DGTA+++ R + + +I+ +SF+ + TG D ++WD + G+ Sbjct: 212 VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI-GHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTG-KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQ 378 HSP 2 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 51/167 (30.54%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 +L H + + +N +G+ +GS+DR LW + L+GH+N + + + G +I + S DKT + W VETGK H + + C LV +GS D TAKLWD++ + T +I ++SF+ + I TG D+ V VW+ G Sbjct: 87 VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDT-ASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI-VCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTG 251 HSP 3 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 47/168 (27.98%), Postives = 84/168 (50.00%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 L GH++ VY + N P G IA+GS D+ LW V G C + +GH I+ L + + + + S D T + WD+++G+++ + H++ + S + G +++GS D T +W+ + T +I++ F+ I TG +D K+WD G+ Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG-NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGK 294
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_DANRE (WD repeat-containing protein 48 OS=Danio rerio GN=wdr48 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 55/176 (31.25%), Postives = 84/176 (47.73%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ IIS S +K LR WD T ++ K+ H V S +R G +SGS DGT +LW + Q+ I T+ + + A+ ++A IY+GG D + DLR + + Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDLRNPDMR 287
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: NUDFA_NEUCR (Nuclear distribution protein pac-1a OS=Neurospora crassa GN=pac-1a PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 58/188 (30.85%), Postives = 85/188 (45.21%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVN-PAG-TVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTT-DGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWD-----------------------MRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLR 691 + GH AV + P G T++AS S D I LW KN L GH +++ + + G+ ++SAS DKTLR WDV TG +K + H +V CPS G ++S SDD T++LWD + A Q I + ++E + TG D +++WD R Sbjct: 152 IKGHTKAVLDVDYGGPRGNTLLASCSSDLTIKLWDPLDSYKNIRTLPGHDHSVSAVRFIPGSGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEWVRDVCPSLDG-KYILSTSDDYTSRLWDVTITNPEPKVTLIGHEHVVLCCAIAPPAAYQNLAAMAGIKKPPATSSAEFMATGSRDKSIRLWDAR 338 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |