FC929858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 45/169 (26.63%), Postives = 84/169 (49.70%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 ++ LTGH + + ++ + +G I +GS D + +W K ++ GH I ++ D S I++ S DKT WD +GK + + H+ + C G L+ + S DGTA++++ R I + +I+ +SF+ + TG D ++WD++ G+ Sbjct: 212 VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLI-GHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQ 378 HSP 2 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 47/168 (27.98%), Postives = 80/168 (47.62%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 L GH++ VY + N P G IA+GS D+ LW G C + +GH I+ L + + + + S D T + WD+++G+++ + H + + S G +++GS D T +WD + T +I++ FS I TG +D +WD G+ Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKC--YHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSG-DRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGK 294
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR69_MACFA (WD repeat-containing protein 69 OS=Macaca fascicularis GN=WDR69 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 203 LLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTD-GSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 +L H + + +N +G+ +GS+DR LW + L+GH+N + + + G + + S DKT + W VETGK H + + C LV +GS D TAKLW+++ + T +I ++SF+ + + I TG D+ V VWD G Sbjct: 87 VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDT-ASGEELNTLEGHRNVVYAIAFNNPYGDKTATGSFDKTCKLWSVETGKCYHTFRGHTAEI-VCLSFNPQSTLVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTG 251 HSP 2 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 46/169 (27.22%), Postives = 78/169 (46.15%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 + L GH + + ++ N +G I +GS D + +W K +L GH I + D S I++ S DKT WD GK + + H+ + C G L+ + S DGTA+++ R I + +I+ +SF+ + TG D ++WD + G+ Sbjct: 212 VCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGK-VNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNGKCVATLTGHDDEILDSCFDYTG-KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQ 378 HSP 3 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 45/168 (26.79%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVN-PAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 L GH++ VY + N P G A+GS D+ LW V G C + +GH I+ L + + + + S D T + W+++ G+++ + H++ + S + G +++GS D T +WD G + +I++ F+ I TG +D +WD G+ Sbjct: 130 LEGHRNVVYAIAFNNPYGDKTATGSFDKTCKLWSVETGKC--YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSG-DRIITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNGK 294
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR31_HUMAN (WD repeat-containing protein 31 OS=Homo sapiens GN=WDR31 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 49/176 (27.84%), Postives = 78/176 (44.32%), Query Frame = 2 Query: 212 GHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQI-----------TAVSFSDASE*IYTGGIDNDVKVWDLRKGESK 706 GH+ + + P + S S DR + +W +HG + L GH + L + D SQ+ + S D TL WDV TG+ +++ + + V C R P ++ S+D T +LWD R FP K I +S S+ GG + +WDLR+ ++ Sbjct: 101 GHEHEITKVACIPKSSQFFSASRDRMVMMWDLHGSSQPRQQLCGHAMVVTGLAVSPDSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTHLCWVPR-EPYILQTSEDKTLRLWDSRGLQVAHMFPAKQHIQTYCEVSVDGHKCISCSNG-----FGGEGCEATLWDLRQTRNR 270
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PWP2_YEAST (Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae GN=PWP2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 48/171 (28.07%), Postives = 88/171 (51.46%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF--PDKYQITAVSFSDASE*IYTGGIDN-DVKVWDLRKGE 700 I L+ Q+ V T+ VN G +A GS L + + +GH ++ L ++ DGS++++AS D ++ WD+ +G + EH S V + ++RG ++ S S DGT + WD+ + +TF ++ Q ++ + E + G +DN D+ VW ++ G+ Sbjct: 295 IQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRG-QVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQ 464
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: POP2_SCHPO (WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe GN=pop2 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKGE 700 L GH +V T ++ G ++ SGS+D I +W V G+C L+GH I + + + + IS S DK++R WD+ TG + H++FV + ++SGS D T ++WD+ + P + SD + I G D VK+WD+R G+ Sbjct: 503 LIGHTDSVRT--ISGYGDILVSGSYDSSIRIWRVSTGEC--LYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQN---RLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKII--SGNDGSVKLWDVRTGK 659
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 49/169 (28.99%), Postives = 77/169 (45.56%), Query Frame = 2 Query: 197 IMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH-GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASE*IYTGGIDNDVKVWDLRKG 697 + T H+ A+++++ + G V+ASGS D + LW + G C+ M L+GH +++ DL W S + +AS DKT+ WD G + H + N + G L S DG KLWD R + T K+ F + + + D VK + G Sbjct: 403 VTTFTDHKQAIWSVRFHHLGEVVASGSLDHTVRLWDLPAGKCR--MALRGHVDSVNDLAWQPFSSSLATASSDKTVSVWDARAGLCTQTYYGHQNSCNGVSFNILGTQL-ASTDADGVVKLWDTRMTAEVATINTGKHPANKSCFDRSGQVLAVACDDGKVKAYSTTDG 568
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_MOUSE (WD repeat-containing protein 48 OS=Mus musculus GN=Wdr48 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ I+S S +K LR WD T ++ K+ H V + R G +SGS DGT +LW + Q+ I T+ + + A+ +DA +Y+GG D + DLR Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLR 282
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: WDR48_CHICK (WD repeat-containing protein 48 OS=Gallus gallus GN=WDR48 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 206 LTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVH--------GDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASE*IYTGGIDNDVKVWDLR 691 L H+ V + ++AS DR IFLW V+ + L G+K++I L G+ I+S S +K LR WD T ++ K+ H V + +R G +SGS DGT +LW + Q+ I T+ + + A+ ++A +Y+GG D + DLR Sbjct: 113 LRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQ-CLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLR 282
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 76/238 (31.93%), Postives = 104/238 (43.70%), Query Frame = 2 Query: 41 EGNMEVVTHQRENENALSTVSARPMEWSTVPYSAPQAPGPNGKQRTSSLESPIMLLTGHQSAVYTMKVNPAGTV-IASGSHDRDIFLWHVHGDCKNFMVL------KGHKNAILDLHWTTDGSQII-SASPDKTLRAWDVETG-KQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG----AIQTFPDKYQITAVSFSDASE*IYTG-GIDNDVKVWDL-RKGESKH 709 E N V Q + A TVS+ + T + P P P+GK SP + LTGH+ Y + NP + S S D+ I +W + K+ L GH + + D+ W S DK L WD TG K I + HNS VN + LV +GS D T LWDMR G ++ + D ++ V FS +E + G D V VWDL R GE ++ Sbjct: 123 EVNRARVMPQNHSIIATKTVSSEVYIFDTTKH--PLEPTPDGKC------SPNLKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLISHTD--EVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQN 350
BLAST of FC929858 vs. ExPASy Swiss-Prot
Match: PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 57/201 (28.36%), Postives = 92/201 (45.77%), Query Frame = 2 Query: 92 STVSARPMEWSTVPYSAPQAPGPNGKQRTSSLES--PIMLLTGHQSAVYTMKVNPAGTVIASGSHDRDIFLWHVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDA-SE*IYTGGIDNDVKVW 682 STVS P + + +A +G + SL+S P+ + GH V + +P+G + + +DR LW + + + +GH + D+ + DGS + D R WD+ TG+ I + H + S G + +GS D T K+WD+RQR + T P + +T V F + TG DN K+W Sbjct: 285 STVSLDPKDVNLASCAA------DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH-IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 477 The following BLAST results are available for this feature:
BLAST of FC929858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 244
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929858 ID=FC929858; Name=FC929858; organism=Citrus clementina; type=EST; length=709bpback to top |