FC929920

Overview
NameFC929920
Unique NameFC929920
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:49..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 442.58 bits (1137), Expect = 1.034e-123
Identity = 212/230 (92.17%), Postives = 223/230 (96.96%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTN+VMVFG ITTKA V+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+P +YLDEKTIF
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIF 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 442.195 bits (1136), Expect = 1.350e-123
Identity = 213/229 (93.01%), Postives = 223/229 (97.38%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            ETFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFG ITTKANV+YEKIVRDTCRNIGF+S+DVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP +YLDEKTIF
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 231          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 442.195 bits (1136), Expect = 1.350e-123
Identity = 212/230 (92.17%), Postives = 223/230 (96.96%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            METFLFTSESVNEGHPDKLCDQISDA+LDACL+QDPDSKVACETCTKTN+VMVFG ITTKANV+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY+N+ GA VP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP +YLDEKTIF
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 442.195 bits (1136), Expect = 1.350e-123
Identity = 213/230 (92.61%), Postives = 224/230 (97.39%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            ME+FLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VMVFG ITTKANV+YEKIVR+TCR IGF+SDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGAKLTEVRKNGTC WLRPDGKTQVTVEY+NENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP +YLDEKTIF
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCREIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 1.764e-123
Identity = 210/229 (91.70%), Postives = 224/229 (97.82%), Query Frame = 3
Query:   45 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            ETFL+TSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFG ITTKANV+YEKIVR+TCRNIGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT+EY+N+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP +YLDEKTIF
Sbjct:    4 ETFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIF 232          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 1.764e-123
Identity = 213/230 (92.61%), Postives = 222/230 (96.52%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDPDSKVACETCTKTN+VMVFG ITTKANV+YEKIVR TCR+IGFVSDDVGLDAD C VLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY NENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP +YLDEKTIF
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 3.008e-123
Identity = 213/230 (92.61%), Postives = 222/230 (96.52%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFG ITTKA V+YEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTNDEIA DLKEHVIKPVIP +YLDE TIF
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYSNDNGAMVPIRVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDENTIF 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 440.654 bits (1132), Expect = 3.929e-123
Identity = 212/230 (92.17%), Postives = 223/230 (96.96%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFG ITTKA+++YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY+NENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP +YLDEKTIF
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADIDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 440.269 bits (1131), Expect = 5.131e-123
Identity = 211/230 (91.74%), Postives = 222/230 (96.52%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETC+KTN+VMVFG ITTKANV+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPV+P +YLDEKTIF
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIF 230          
BLAST of FC929920 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 440.269 bits (1131), Expect = 5.131e-123
Identity = 211/230 (91.74%), Postives = 224/230 (97.39%), Query Frame = 3
Query:   42 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGGITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP*EYLDEKTIF 731
            ++TFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFG ITTKA+V+YEKIVR TCR+IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHLS+RPEEIGAGDQGHMFGYA+DETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP +YLDEKTIF
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 234          
The following BLAST results are available for this feature:
BLAST of FC929920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_CATRO1.034e-12392.17S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_PHALU1.350e-12393.01S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK2_VITVI1.350e-12392.17S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK2_BRAJU1.350e-12392.61S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK_MEDFA1.764e-12391.70S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK2_POPTR1.764e-12392.61S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK1_SOLLC3.008e-12392.61S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK5_VITVI3.929e-12392.17S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK2_ELAUM5.131e-12391.74S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK2_ATRNU5.131e-12391.74S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionC34001H03EF PostHarvC1 Citrus clementina cDNA clone C34001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929920 ID=FC929920; Name=FC929920; organism=Citrus clementina; type=EST; length=733bp
GAATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACT
TTTTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTG
TGATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAG
ATAGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTT
TTTGGAGGGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCG
TGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATG
CTGATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATC
GCCCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGC
TGGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAAT
TTATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACC
GAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGAC
ACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGA
GAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAAT
GATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCC
CTGAGAGTACCTTGATGAGAAGACTATCTTCCA
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