FC929926

Overview
NameFC929926
Unique NameFC929926
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:28..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.320e-62
Identity = 117/215 (54.42%), Postives = 149/215 (69.30%), Query Frame = 3
Query:   96 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            ++L + A  +  PGKGI+A DEST TI KR S + +EN E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  NA+ LARYA +CQE GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+ EGT+L
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFSGVGIENTEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAKYMADHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTIL 218          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.958e-62
Identity = 116/215 (53.95%), Postives = 152/215 (70.70%), Query Frame = 3
Query:   96 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + E G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL + +V+ EGT+L
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTIL 218          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.817e-62
Identity = 115/215 (53.49%), Postives = 152/215 (70.70%), Query Frame = 3
Query:   96 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL + +V+ EGT+L
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMADHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTIL 218          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.401e-59
Identity = 125/222 (56.31%), Postives = 153/222 (68.92%), Query Frame = 3
Query:   75 CFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            C  GKY +ELIK A  + + G+GILA DES  T GKRL SI VEN E NRRA RELL   PG  QY+SG ILFEETLYQ TA+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG     + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI++C +V E + A  +K + D+ V+ +G LL
Sbjct:   25 CAPGKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILL 242          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 107/221 (48.42%), Postives = 134/221 (60.63%), Query Frame = 3
Query:   81 KGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            K  Y  ELI+ A  +  PGKG+LAADESTG+  KR + I + N   +RR  R L+    G  QY+SGVIL +ET+YQK   G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI  C  V++ V +    AL+ H V+ EG LL
Sbjct:   19 KTPYEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALHRHGVVWEGCLL 239          
BLAST of FC929926 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.569e-41
Identity = 88/202 (43.56%), Postives = 126/202 (62.38%), Query Frame = 3
Query:  135 GKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLSEGTLL 740
            GKGILAADE+  T+G+R   + + N E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + + +  +VT ++L+   K LN   V   G L+
Sbjct:   21 GKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLI 220          
The following BLAST results are available for this feature:
BLAST of FC929926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_XANCP2.320e-6254.42Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT3.958e-6253.95Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA8.817e-6253.49Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE2.401e-5956.31Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_TRYBB1.321e-4948.42Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_ENCCU6.569e-4143.56Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionC34001H09EF PostHarvC1 Citrus clementina cDNA clone C34001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929926 ID=FC929926; Name=FC929926; organism=Citrus clementina; type=EST; length=740bp
GGCATAAAAATCGCTCTCTCTGTTTCTCCCTCTAACAAAACAAATTTTCT
ATCTTCAAGTAGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGATGA
GCTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTG
CTGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATCAAT
GTTGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTG
CACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGA
CCCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAG
GAGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCT
TGCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCC
AGCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGT
GCTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGA
GAATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCC
TTGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATC
AACAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGC
TCTGAATGACCACCATGTCCTTTCTGAGGGTACCCTTTTG
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