FC929935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_SULSH (NADP-specific glutamate dehydrogenase (Fragment) OS=Sulfolobus shibatae GN=gdhA PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.920e-55 Identity = 111/234 (47.44%), Postives = 145/234 (61.97%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGG+RY P V DEV AL+ +MTWK ++ +PYGG KGGI +P L++ ELE L+R + Q IH+ +G D+PAPD+ T PQTMAW LDEY K G AV TGKP +LGG R +TG GV N+ I G R +IQGFGNVGS+ A+ + E G KI+ VSDI G + + GIDV L+ V+ V + G + + +L DCD+LIPAA+ VIN+ Sbjct: 43 PYKGGVRYSPNVTQDEVIALSMIMTWKNSLLLLPYGGGKGGIRVDPKKLTLKELEDLSRKYVQLIHNYLGSDVDIPAPDINTNPQTMAWFLDEYIKITGEVDFAVFTGKPSELGGIGVRLYSTGLGVATIAREAANKFIGGIEGSRVIIQGFGNVGSFTAKFLNEMGAKIIGVSDIGGGVISDDGIDVNKALEVVQSTGSVVNYPEGKKVTNEELLTSDCDILIPAAVENVINK 276
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_SULSO (Glutamate dehydrogenase 2 OS=Sulfolobus solfataricus GN=gdhA-2 PE=1 SV=3) HSP 1 Score: 210.69 bits (535), Expect = 6.177e-54 Identity = 108/234 (46.15%), Postives = 145/234 (61.97%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGG+RYHP V DEV AL+ +MTWK ++ +PYGG KGG+ +P L+ ELE+L+R + Q I+ +G D+PAPD+ T QTMAW LDEY K G AV TGKP++LGG R +TG GV + N+ + R +IQGFGNVG +A + + E G KIV VSD G + N KGIDV ++ ++ V + G + + +LI DCD+LIPAAL VIN+ Sbjct: 71 PYKGGVRYHPNVTQDEVEALSMIMTWKNSLLLLPYGGGKGGVRVDPKKLTREELEQLSRKYIQAIYKYLGSELDIPAPDVNTDSQTMAWFLDEYIKITGKVDFAVFTGKPVELGGIGVRLYSTGLGVATIAKEAANKFIGGVEEARVIIQGFGNVGYYAGKFLSEMGAKIVGVSDSKGGVINEKGIDVGKAIEIKEKTGSVINYPEGRKVTNEELLISDCDILIPAALENVINK 304
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_BACSU (NAD-specific glutamate dehydrogenase OS=Bacillus subtilis GN=rocG PE=1 SV=3) HSP 1 Score: 208.764 bits (530), Expect = 2.347e-53 Identity = 102/232 (43.97%), Postives = 149/232 (64.22%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHG-HSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HPEV+ +EV AL+ MT K +AN+PYGG KGGI C+P +S ELERL+R + + I ++G D+PAPD+ T Q MAW++DEYS+ SP +TGKP+ LGGS GR+ AT +GV E + + G + R +IQGFGN GS+ A+ + + G K++ +SD +G + N G+D+P LL ++ G+ D I + +L +DCD+L+PAA+ I Sbjct: 78 PTKGGVRFHPEVNEEEVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDK-RDSFGMVTNLFTDVITNEELLEKDCDILVPAAISNQI 308
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_STAAW (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=gluD PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52 Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+R + + I +G + D+PAPD+ T Q MAW++DEYS KF +SP +TGKPI LGGS GRD +T GV+ A E I G + VIQGFGN GS+ A+ + + G KIV +SD GA+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I Sbjct: 68 PTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKF--NSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQI 298
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_STAAS (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=gluD PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52 Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+R + + I +G + D+PAPD+ T Q MAW++DEYS KF +SP +TGKPI LGGS GRD +T GV+ A E I G + VIQGFGN GS+ A+ + + G KIV +SD GA+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I Sbjct: 68 PTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKF--NSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQI 298
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_STAAR (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=gluD PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52 Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+R + + I +G + D+PAPD+ T Q MAW++DEYS KF +SP +TGKPI LGGS GRD +T GV+ A E I G + VIQGFGN GS+ A+ + + G KIV +SD GA+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I Sbjct: 68 PTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKF--NSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQI 298
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_STAAN (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=gluD PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52 Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+R + + I +G + D+PAPD+ T Q MAW++DEYS KF +SP +TGKPI LGGS GRD +T GV+ A E I G + VIQGFGN GS+ A+ + + G KIV +SD GA+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I Sbjct: 68 PTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKF--NSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQI 298
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_STAAM (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gluD PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52 Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+R + + I +G + D+PAPD+ T Q MAW++DEYS KF +SP +TGKPI LGGS GRD +T GV+ A E I G + VIQGFGN GS+ A+ + + G KIV +SD GA+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I Sbjct: 68 PTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKF--NSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQI 298
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_STAAC (NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=gluD PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52 Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+R + + I +G + D+PAPD+ T Q MAW++DEYS KF +SP +TGKPI LGGS GRD +T GV+ A E I G + VIQGFGN GS+ A+ + + G KIV +SD GA+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I Sbjct: 68 PTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKF--NSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQI 298
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_THEPR (Glutamate dehydrogenase OS=Thermococcus profundus GN=gdhA PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.895e-51 Identity = 105/235 (44.68%), Postives = 144/235 (61.28%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGGIR+HP V ALA MTWK AV ++PYGG KGGI NP +LS E ERL R + + ++D+IG D+PAPD+ T P+ M W++DEY + G + V+TGKP+ +GGSLGR AT +G +F G ++ G++ +QG+GN G + A+L E+ G +VAVSD G I N G+D +LK +EH VK F G +I + +L + DVL PAA+ VI Sbjct: 67 PTKGGIRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVYDVIGPWTDIPAPDVYTNPKIMGWMMDEYETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVVAVSDSRGGIYNPDGLDPDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVI 301 The following BLAST results are available for this feature:
BLAST of FC929935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929935 ID=FC929935; Name=FC929935; organism=Citrus clementina; type=EST; length=702bpback to top |